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  5. Solyc01g081090.2.1

Solyc01g081090.2.1 (Solyc01g081090)


Aliases : Solyc01g081090

Description : transcription factor (bHLH)


Gene families : OG0005877 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005877_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g081090.2.1
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00183690 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.05 OrthoFinder output from all 47 species
AT1G06170 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.06 OrthoFinder output from all 47 species
AT2G31220 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.09 OrthoFinder output from all 47 species
Aspi01Gene69047.t1 Aspi01Gene69047 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.14G094900.1 Ceric.14G094900 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.21G089700.1 Ceric.21G089700 bHLH-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
GSVIVT01011330001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 OrthoFinder output from all 47 species
LOC_Os01g18870.1 LOC_Os01g18870 transcription factor (bHLH) 0.06 OrthoFinder output from all 47 species
LOC_Os04g51070.1 LOC_Os04g51070 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Len_g59537 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_1220g0010 No alias transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
MA_155093g0010 No alias transcription factor (bHLH) 0.01 OrthoFinder output from all 47 species
Nbi_g26295 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g41320 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g43808 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g16733 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Smo81013 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
Spa_g43678 No alias bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g48415 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e025435_P001 Zm00001e025435 transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0009116 nucleoside metabolic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:1901657 glycosyl compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 196 241
No external refs found!