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  5. Solyc01g079210.3.1

Solyc01g079210.3.1 (Solyc01g079210)


Aliases : Solyc01g079210

Description : SWC4 recruitment factor of SWR1 chromatin remodeling complex


Gene families : OG0003748 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003748_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g079210.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00249970 evm_27.TU.AmTr_v1... Chromatin organisation.chromatin remodeling... 0.04 OrthoFinder output from all 47 species
Azfi_s0305.g063922 No alias recruitment factor of SWR1 chromatin remodeling complex... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020537.44 No alias Chromatin organisation.chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Cre03.g144907 No alias Chromatin organisation.chromatin remodeling... 0.01 OrthoFinder output from all 47 species
Ehy_g01374 No alias recruitment factor of SWR1 chromatin remodeling complex... 0.02 OrthoFinder output from all 47 species
LOC_Os05g46330.1 LOC_Os05g46330 SWC4 recruitment factor of SWR1 chromatin remodeling complex 0.03 OrthoFinder output from all 47 species
MA_24533g0010 No alias SWC4 recruitment factor of SWR1 chromatin remodeling complex 0.02 OrthoFinder output from all 47 species
Mp7g18640.1 No alias SWC4 recruitment factor of SWR1 chromatin remodeling complex 0.02 OrthoFinder output from all 47 species
Nbi_g01940 No alias recruitment factor of SWR1 chromatin remodeling complex... 0.02 OrthoFinder output from all 47 species
Zm00001e014015_P003 Zm00001e014015 SWC4 recruitment factor of SWR1 chromatin remodeling complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
InterPro domains Description Start Stop
IPR032563 DAMP1_SANT-like 103 177
No external refs found!