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  5. Solyc01g067750.3.1

Solyc01g067750.3.1 (MEE32, EMB3004, Solyc01g067750)


Aliases : MEE32, EMB3004, Solyc01g067750

Description : 3-dehydroquinate dehydratase and shikimate dehydrogenase


Gene families : OG0001444 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001444_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Solyc01g067750.3.1

Target Alias Description ECC score Gene Family Method Actions
AT3G06350 MEE32, EMB3004 dehydroquinate dehydratase, putative / shikimate... 0.1 OrthoFinder output from all 47 species
Adi_g054891 MEE32, EMB3004 3-dehydroquinate dehydratase and shikimate dehydrogenase... 0.02 OrthoFinder output from all 47 species
Ala_g28387 MEE32, EMB3004 3-dehydroquinate dehydratase and shikimate dehydrogenase... 0.03 OrthoFinder output from all 47 species
Als_g11756 MEE32, EMB3004 3-dehydroquinate dehydratase and shikimate dehydrogenase... 0.02 OrthoFinder output from all 47 species
Aob_g16805 MEE32, EMB3004 3-dehydroquinate dehydratase and shikimate dehydrogenase... 0.03 OrthoFinder output from all 47 species
Aspi01Gene45180.t1 MEE32, EMB3004,... 3-dehydroquinate dehydratase and shikimate dehydrogenase... 0.04 OrthoFinder output from all 47 species
Cba_g39092 MEE32, EMB3004 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cre08.g380201 MEE32, EMB3004 Amino acid metabolism.biosynthesis.shikimate... 0.01 OrthoFinder output from all 47 species
Dac_g12106 MEE32, EMB3004 3-dehydroquinate dehydratase and shikimate dehydrogenase... 0.03 OrthoFinder output from all 47 species
Ehy_g02651 MEE32, EMB3004 3-dehydroquinate dehydratase and shikimate dehydrogenase... 0.04 OrthoFinder output from all 47 species
Gb_24244 MEE32, EMB3004 3-dehydroquinate dehydratase and shikimate dehydrogenase 0.05 OrthoFinder output from all 47 species
LOC_Os01g27750.1 MEE32, EMB3004,... 3-dehydroquinate dehydratase and shikimate dehydrogenase 0.05 OrthoFinder output from all 47 species
LOC_Os12g34874.2 MEE32, EMB3004,... 3-dehydroquinate dehydratase and shikimate dehydrogenase 0.03 OrthoFinder output from all 47 species
Ore_g20901 MEE32, EMB3004 3-dehydroquinate dehydratase and shikimate dehydrogenase... 0.03 OrthoFinder output from all 47 species
Zm00001e017662_P001 MEE32, EMB3004,... 3-dehydroquinate dehydratase and shikimate dehydrogenase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003855 3-dehydroquinate dehydratase activity IEA Interproscan
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004017 adenylate kinase activity IEP HCCA
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
MF GO:0019205 nucleobase-containing compound kinase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
MF GO:0050145 nucleoside monophosphate kinase activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001381 DHquinase_I 25 261
IPR006151 Shikm_DH/Glu-tRNA_Rdtase 393 464
IPR013708 Shikimate_DH-bd_N 275 355
IPR041121 SDH_C 513 540
No external refs found!