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  5. Solyc01g067600.3.1

Solyc01g067600.3.1 (Solyc01g067600)


Aliases : Solyc01g067600

Description : no hits & (original description: none)


Gene families : OG0002651 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002651_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g067600.3.1
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00195320 evm_27.TU.AmTr_v1... No description available 0.06 OrthoFinder output from all 47 species
AT1G02990 No alias BEST Arabidopsis thaliana protein match is: CW-type Zinc... 0.07 OrthoFinder output from all 47 species
AT3G62900 No alias CW-type Zinc Finger 0.09 OrthoFinder output from all 47 species
Adi_g024497 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g114343 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g37199 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g43022 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g21202 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g14406 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene04571.t1 Aspi01Gene04571 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g32046 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.34G045900.1 Ceric.34G045900 not classified & original description: pacid=50623623... 0.06 OrthoFinder output from all 47 species
Dcu_g03192 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g19968 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g25271 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01010964001 No alias No description available 0.1 OrthoFinder output from all 47 species
GSVIVT01017765001 No alias No description available 0.06 OrthoFinder output from all 47 species
Gb_16688 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os03g22580.2 LOC_Os03g22580 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Mp7g19200.1 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Msp_g38313 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g15187 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03272 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sam_g16207 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo426541 No alias No description available 0.05 OrthoFinder output from all 47 species
Zm00001e035816_P001 Zm00001e035816 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
InterPro domains Description Start Stop
IPR011124 Znf_CW 638 683
No external refs found!