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Aliases : Solyc01g060140
Description : transcription factor (CAMTA)
Gene families : OG0000648 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000648_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc01g060140.4.1 | |
| Cluster | HCCA: Cluster_206 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT4G16150 | No alias | calmodulin binding;transcription regulators | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g07998 | No alias | CAMTA-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g14066 | CAMTA3, SR1 | CAMTA-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.12G055700.1 | CAMTA3, SR1,... | CAMTA-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.31G070500.1 | CAMTA3, SR1,... | CAMTA-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g13216 | CAMTA3, SR1 | CAMTA-type transcription factor & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| GSVIVT01002635001 | No alias | No description available | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01004860001 | CAMTA3, SR1 | RNA biosynthesis.transcriptional activation.CAMTA... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01010510001 | No alias | RNA biosynthesis.transcriptional activation.CAMTA... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01035027001 | No alias | RNA biosynthesis.transcriptional activation.CAMTA... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os07g30774.1 | LOC_Os07g30774 | transcription factor (CAMTA) | 0.08 | OrthoFinder output from all 47 species | |
| MA_10434871g0010 | No alias | transcription factor (CAMTA) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e002794_P002 | CAMTA3, SR1,... | transcription factor (CAMTA) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
| BP | GO:0008104 | protein localization | IEP | HCCA |
| BP | GO:0015031 | protein transport | IEP | HCCA |
| BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
| BP | GO:0033036 | macromolecule localization | IEP | HCCA |
| BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
| BP | GO:0046907 | intracellular transport | IEP | HCCA |
| BP | GO:0051641 | cellular localization | IEP | HCCA |
| BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
| BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
| BP | GO:0071702 | organic substance transport | IEP | HCCA |
| BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR020683 | DUF3447 | 310 | 390 |
| No external refs found! |