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  5. Solyc01g059960.1.1

Solyc01g059960.1.1 (RGL2, Solyc01g059960)


Aliases : RGL2, Solyc01g059960

Description : transcription factor (GRAS). MIG1 GRAS-type transcription factor


Gene families : OG0011629 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0011629_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g059960.1.1
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00166p00046540 LAS, SCL18,... External stimuli response.biotic... 0.05 OrthoFinder output from all 47 species
AMTR_s00166p00048460 RGL2,... External stimuli response.biotic... 0.06 OrthoFinder output from all 47 species
AMTR_s00166p00053380 LAS, SCL18,... External stimuli response.biotic... 0.02 OrthoFinder output from all 47 species
Solyc01g079370.4.1 Solyc01g079370 transcription factor (GRAS). MIG1 GRAS-type transcription factor 0.07 OrthoFinder output from all 47 species
Solyc06g009610.1.1 Solyc06g009610 transcription factor (GRAS). MIG1 GRAS-type transcription factor 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004866 endopeptidase inhibitor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0030414 peptidase inhibitor activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
MF GO:0061134 peptidase regulator activity IEP HCCA
MF GO:0061135 endopeptidase regulator activity IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR005202 TF_GRAS 101 469
No external refs found!