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  5. Solyc01g058720.4.1

Solyc01g058720.4.1 (CP1, ATCP1, Solyc01g058720)


Aliases : CP1, ATCP1, Solyc01g058720

Description : Calcium-binding protein CP1 OS=Arabidopsis thaliana (sp|q9fdx6|cp1_arath : 100.0)


Gene families : OG0002586 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002586_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g058720.4.1
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
AT5G49480 CP1, ATCP1 Ca2+-binding protein 1 0.11 OrthoFinder output from all 47 species
Aev_g05732 TCH3, ATCAL4 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g32875 CP1, ATCP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g61644 CP1, ATCP1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g08743 UNE14 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g14098 UNE14 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08553 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene25877.t1 UNE14, Aspi01Gene25877 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene25879.t1 UNE14, Aspi01Gene25879 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene53735.t2 UNE14, Aspi01Gene53735 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene53739.t2 UNE14, Aspi01Gene53739 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene53740.t1 UNE14, Aspi01Gene53740 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene53742.t1 UNE14, Aspi01Gene53742 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.24G033500.1 Ceric.24G033500 not classified & original description: pacid=50629229... 0.02 OrthoFinder output from all 47 species
Ceric.24G033800.1 CPK19, Ceric.24G033800 not classified & original description: pacid=50628780... 0.02 OrthoFinder output from all 47 species
Dac_g25895 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g36416 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g03544 MSS3 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g20281 UNE14 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g48934 UNE14 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Gb_05638 CP1, ATCP1 Calcium-binding protein CP1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_05639 CP1, ATCP1 Calcium-binding protein CP1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os03g19720.1 CP1, ATCP1,... Calcium-binding protein CP1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Len_g13581 UNE14 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g04795 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g28001 CP1, ATCP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g44730 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g50847 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e038319_P001 CP1, ATCP1,... Calcium-binding protein CP1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0005102 signaling receptor binding IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
MF GO:0008083 growth factor activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0008283 cell population proliferation IEP HCCA
MF GO:0009916 alternative oxidase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0030545 signaling receptor regulator activity IEP HCCA
MF GO:0030546 signaling receptor activator activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0048018 receptor ligand activity IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 18 75
IPR002048 EF_hand_dom 100 122
No external refs found!