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Aliases : Solyc01g057220
Description : pectin methylesterase
Gene families : OG0000147 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000147_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00003p00239700 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00033p00227850 | evm_27.TU.AmTr_v1... | Probable pectinesterase/pectinesterase inhibitor 21... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00040p00188020 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00129p00028250 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G53830 | ATPME2, PME2 | pectin methylesterase 2 | 0.04 | OrthoFinder output from all 47 species | |
| AT2G26450 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.05 | OrthoFinder output from all 47 species | |
| AT3G05610 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | OrthoFinder output from all 47 species | |
| AT3G06830 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | OrthoFinder output from all 47 species | |
| AT3G10710 | RHS12 | root hair specific 12 | 0.03 | OrthoFinder output from all 47 species | |
| AT3G49220 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | OrthoFinder output from all 47 species | |
| AT4G02330 | ATPMEPCRB | Plant invertase/pectin methylesterase inhibitor superfamily | 0.05 | OrthoFinder output from all 47 species | |
| AT4G15980 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.06 | OrthoFinder output from all 47 species | |
| AT4G33230 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.04 | OrthoFinder output from all 47 species | |
| AT5G04960 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | OrthoFinder output from all 47 species | |
| AT5G04970 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | OrthoFinder output from all 47 species | |
| Als_g05037 | ATPMEPCRF, PMEPCRF | EC_3.1 hydrolase acting on ester bond & original... | 0.04 | OrthoFinder output from all 47 species | |
| Als_g38529 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g26087 | No alias | EC_3.1 hydrolase acting on ester bond & original... | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g29199 | No alias | EC_3.1 hydrolase acting on ester bond & original... | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g08872 | No alias | EC_3.1 hydrolase acting on ester bond & original... | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene11209.t1 | Aspi01Gene11209 | EC_3.1 hydrolase acting on ester bond & original... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0215.g058412 | No alias | EC_3.1 hydrolase acting on ester bond & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.19G056000.1 | ATPMEPCRF,... | EC_3.1 hydrolase acting on ester bond & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g48560 | ATPME2, PME2 | EC_3.1 hydrolase acting on ester bond & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g16152 | No alias | EC_3.1 hydrolase acting on ester bond & original... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01016667001 | PME1, ATPME1 | Cell wall.pectin.homogalacturonan.modification and... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01017687001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01028264001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.07 | OrthoFinder output from all 47 species | |
| GSVIVT01028265001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01031165001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01035108001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_06356 | No alias | pectin methylesterase | 0.06 | OrthoFinder output from all 47 species | |
| Gb_24214 | No alias | pectin methylesterase | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os01g15039.1 | LOC_Os01g15039 | pectin methylesterase | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g21034.1 | ATPME3, PME3,... | pectin methylesterase | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g18860.1 | LOC_Os03g18860 | pectin methylesterase | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g38560.1 | LOC_Os04g38560 | pectin methylesterase | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os07g49100.1 | LOC_Os07g49100 | pectin methylesterase | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os08g34910.1 | LOC_Os08g34910 | pectin methylesterase | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os09g26360.1 | LOC_Os09g26360 | pectin methylesterase | 0.02 | OrthoFinder output from all 47 species | |
| MA_648837g0010 | ATPMEPCRF, PMEPCRF | pectin methylesterase | 0.02 | OrthoFinder output from all 47 species | |
| Mp8g00060.1 | ATPME2, PME2 | pectin methylesterase | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g01365 | PME44, ATPME44 | EC_3.1 hydrolase acting on ester bond & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g15225 | No alias | EC_3.1 hydrolase acting on ester bond & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g20165 | No alias | EC_3.1 hydrolase acting on ester bond & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g22612 | No alias | EC_3.1 hydrolase acting on ester bond & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g28064 | No alias | EC_3.1 hydrolase acting on ester bond & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g07525 | ATPMEPCRF, PMEPCRF | EC_3.1 hydrolase acting on ester bond & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g31109 | ATPMEPCRF, PMEPCRF | EC_3.1 hydrolase acting on ester bond & original... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g066360.3.1 | Solyc01g066360 | pectin methylesterase | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g066390.4.1 | Solyc01g066390 | Probable pectinesterase/pectinesterase inhibitor 58... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc01g066420.3.1 | Solyc01g066420 | pectin methylesterase | 0.04 | OrthoFinder output from all 47 species | |
| Solyc02g014300.2.1 | Solyc02g014300 | pectin methylesterase | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g078090.4.1 | Solyc03g078090 | pectin methylesterase | 0.04 | OrthoFinder output from all 47 species | |
| Solyc03g083870.4.1 | Solyc03g083870 | pectin methylesterase | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g009180.3.1 | Solyc06g009180 | pectin methylesterase | 0.03 | OrthoFinder output from all 47 species | |
| Solyc07g017560.4.1 | Solyc07g017560 | pectin methylesterase | 0.02 | OrthoFinder output from all 47 species | |
| Solyc07g017600.3.1 | PME44, ATPME44,... | pectin methylesterase | 0.03 | OrthoFinder output from all 47 species | |
| Solyc12g099410.2.1 | Solyc12g099410 | pectin methylesterase | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g15341 | ATPME2, PME2 | EC_3.1 hydrolase acTing on ester bond & original... | 0.07 | OrthoFinder output from all 47 species | |
| Tin_g20566 | No alias | EC_3.1 hydrolase acTing on ester bond & original... | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e009863_P001 | Zm00001e009863 | pectin methylesterase | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e034231_P001 | Zm00001e034231 | pectin methylesterase | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e035932_P003 | Zm00001e035932 | pectin methylesterase | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e041006_P001 | Zm00001e041006 | pectin methylesterase | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004857 | enzyme inhibitor activity | IEA | Interproscan |
| MF | GO:0030599 | pectinesterase activity | IEA | Interproscan |
| BP | GO:0042545 | cell wall modification | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0016829 | lyase activity | IEP | HCCA |
| MF | GO:0016835 | carbon-oxygen lyase activity | IEP | HCCA |
| MF | GO:0016837 | carbon-oxygen lyase activity, acting on polysaccharides | IEP | HCCA |
| MF | GO:0030570 | pectate lyase activity | IEP | HCCA |
| No external refs found! |