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  5. Solyc01g018020.3.1

Solyc01g018020.3.1 (Solyc01g018020)


Aliases : Solyc01g018020

Description : transketolase. transketolase


Gene families : OG0001949 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001949_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g018020.3.1
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0003.g007897 No alias EC_2.2 transferase transferring aldehyde or ketonic... 0.05 OrthoFinder output from all 47 species
Azfi_s0375.g067262 No alias EC_2.2 transferase transferring aldehyde or ketonic... 0.12 OrthoFinder output from all 47 species
Cba_g15672 No alias EC_2.2 transferase transferring aldehyde or ketonic... 0.02 OrthoFinder output from all 47 species
Ceric.12G096400.1 Ceric.12G096400 EC_2.2 transferase transferring aldehyde or ketonic... 0.06 OrthoFinder output from all 47 species
Dac_g07332 No alias EC_2.2 transferase transferring aldehyde or ketonic... 0.04 OrthoFinder output from all 47 species
GSVIVT01018555001 No alias Carbohydrate metabolism.oxidative pentose phosphate... 0.01 OrthoFinder output from all 47 species
LOC_Os04g19740.1 LOC_Os04g19740 transketolase. transketolase 0.03 OrthoFinder output from all 47 species
Len_g30064 No alias EC_2.2 transferase transferring aldehyde or ketonic... 0.03 OrthoFinder output from all 47 species
Lfl_g38689 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g36534 No alias EC_2.2 transferase transferring aldehyde or ketonic... 0.04 OrthoFinder output from all 47 species
Smo268939 No alias Carbohydrate metabolism.oxidative pentose phosphate... 0.06 OrthoFinder output from all 47 species
Zm00001e008529_P001 Zm00001e008529 transketolase. transketolase 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003872 6-phosphofructokinase activity IEP HCCA
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
MF GO:0004470 malic enzyme activity IEP HCCA
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP HCCA
MF GO:0004474 malate synthase activity IEP HCCA
CC GO:0005811 lipid droplet IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006081 cellular aldehyde metabolic process IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006097 glyoxylate cycle IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006541 glutamine metabolic process IEP HCCA
BP GO:0006542 glutamine biosynthetic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
MF GO:0008443 phosphofructokinase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009415 response to water IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
CC GO:0012511 monolayer-surrounded lipid storage body IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016615 malate dehydrogenase activity IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
MF GO:0019200 carbohydrate kinase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046487 glyoxylate metabolic process IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
InterPro domains Description Start Stop
IPR005474 Transketolase_N 1 303
IPR033248 Transketolase_C 522 630
IPR005475 Transketolase-like_Pyr-bd 328 497
No external refs found!