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  5. Solyc01g016390.4.1

Solyc01g016390.4.1 (TBL2, Solyc01g016390)


Aliases : TBL2, Solyc01g016390

Description : Protein trichome birefringence OS=Arabidopsis thaliana (sp|q9fg35|tbr_arath : 175.0)


Gene families : OG0000038 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g016390.4.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00114p00129910 TBL8,... Protein trichome birefringence-like 8 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT3G02440 TBL20 TRICHOME BIREFRINGENCE-LIKE 20 0.03 OrthoFinder output from all 47 species
AT3G55990 ESK1, TBL29 Plant protein of unknown function (DUF828) 0.02 OrthoFinder output from all 47 species
AT5G01360 TBL3 Plant protein of unknown function (DUF828) 0.02 OrthoFinder output from all 47 species
AT5G15890 TBL21 TRICHOME BIREFRINGENCE-LIKE 21 0.05 OrthoFinder output from all 47 species
AT5G20590 TBL5 TRICHOME BIREFRINGENCE-LIKE 5 0.03 OrthoFinder output from all 47 species
Aev_g17846 TBL16 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene64215.t1 TBL11, Aspi01Gene64215 rhamnogalacturonan-I O-acetyltransferase *(TBL) &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene64222.t1 TBL14, Aspi01Gene64222 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0003.g008163 TBL7 not classified & original description: CDS=268-1311 0.04 OrthoFinder output from all 47 species
Azfi_s0056.g034193 TBL10 not classified & original description: CDS=52-624 0.03 OrthoFinder output from all 47 species
Azfi_s0061.g034871 TBL25 not classified & original description: CDS=197-1354 0.04 OrthoFinder output from all 47 species
Azfi_s0111.g045700 TBL25 not classified & original description: CDS=1-1209 0.03 OrthoFinder output from all 47 species
Azfi_s0121.g046854 TBL16 not classified & original description: CDS=76-1164 0.05 OrthoFinder output from all 47 species
Cba_g05722 TBL25 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.14G097700.1 TBL7, Ceric.14G097700 not classified & original description: pacid=50633077... 0.03 OrthoFinder output from all 47 species
Dac_g02252 TBL23 mannan O-acetyltransferase *(MOAT) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g01695 TBL25 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g04740 TBL12 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g05372 TBL26 mannan O-acetyltransferase *(MOAT) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g38749 TBL25 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g19524 YLS7, TBL17 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26018 TBL5 polysaccharide O-acetyltransferase *(TBR) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g05923 TBL2 polysaccharide O-acetyltransferase *(TBR) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01010030001 TBL7 Protein trichome berefringence-like 7 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01032800001 ESK1, TBL29 Cell wall.hemicellulose.xylan.modification and... 0.03 OrthoFinder output from all 47 species
LOC_Os01g30970.1 TBL8, LOC_Os01g30970 Protein trichome birefringence-like 8 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os06g10560.1 TBR, LOC_Os06g10560 Protein trichome birefringence-like 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os06g44900.1 TBL5, LOC_Os06g44900 Protein trichome birefringence-like 5 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Len_g15770 TBL26 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10436708g0010 TBL6 Protein trichome birefringence-like 6 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
MA_2603g0010 TBL36 xylan O-acetyltransferase (XOAT) 0.04 OrthoFinder output from all 47 species
MA_2962g0010 TBL6 Protein trichome birefringence-like 6 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Msp_g15165 TBL11 rhamnogalacturonan-I O-acetyltransferase *(TBL) &... 0.03 OrthoFinder output from all 47 species
Nbi_g19102 TBL23 mannan O-acetyltransferase *(MOAT) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g17619 TBL16 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g07766 TBL13 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g10001 TBL7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17420 TBL27 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g18523 TBL26 mannan O-acetyltransferase *(MOAT) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g56592 TBL14 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0074.g017259 TBL25 not classified & original description: CDS=37-1263 0.02 OrthoFinder output from all 47 species
Sam_g34411 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g089680.4.1 TBL19, Solyc02g089680 Protein trichome birefringence-like 19 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc06g007170.4.1 PMR5, TBL44,... Protein PMR5 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc08g082060.3.1 TBL23, Solyc08g082060 mannan O-acetyltransferase (MOAT) 0.05 OrthoFinder output from all 47 species
Solyc10g078910.3.1 TBR, Solyc10g078910 Protein trichome birefringence OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g17303 TBL13 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g22187 TBL27 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10212 TBL21 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e016459_P001 TBL38, Zm00001e016459 Protein trichome birefringence-like 38 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e020296_P001 TBL20, Zm00001e020296 Protein trichome birefringence-like 20 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e020302_P001 TBL38, Zm00001e020302 Protein trichome birefringence-like 38 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e039345_P001 TBL11, Zm00001e039345 rhamnogalacturonan-I O-acetyltransferase (TBL) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
InterPro domains Description Start Stop
IPR026057 PC-Esterase 56 128
IPR025846 TBL_N 3 54
No external refs found!