Solyc01g016380.4.1 (TBR, Solyc01g016380)


Aliases : TBR, Solyc01g016380

Description : Protein trichome birefringence OS=Arabidopsis thaliana (sp|q9fg35|tbr_arath : 333.0)


Gene families : OG0000038 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g016380.4.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00095940 TBL16,... Protein trichome birefringence-like 16 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00025p00185280 YLS7, TBL17,... Protein YLS7 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT1G70230 TBL27 TRICHOME BIREFRINGENCE-LIKE 27 0.03 OrthoFinder output from all 47 species
AT3G02440 TBL20 TRICHOME BIREFRINGENCE-LIKE 20 0.05 OrthoFinder output from all 47 species
AT3G55990 ESK1, TBL29 Plant protein of unknown function (DUF828) 0.03 OrthoFinder output from all 47 species
AT5G01360 TBL3 Plant protein of unknown function (DUF828) 0.03 OrthoFinder output from all 47 species
AT5G15890 TBL21 TRICHOME BIREFRINGENCE-LIKE 21 0.04 OrthoFinder output from all 47 species
Aev_g17846 TBL16 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g03631 TBL14 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26792 TBL23 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07350 TBL5 polysaccharide O-acetyltransferase *(TBR) & original... 0.02 OrthoFinder output from all 47 species
Aop_g20853 TBL11 rhamnogalacturonan-I O-acetyltransferase *(TBL) &... 0.02 OrthoFinder output from all 47 species
Aop_g21288 TBL25 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g29258 TBL14 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g62332 TBL25 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene53136.t1 TBL25, Aspi01Gene53136 mannan O-acetyltransferase *(MOAT) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene64222.t1 TBL14, Aspi01Gene64222 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene64231.t1 TBL14, Aspi01Gene64231 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g008163 TBL7 not classified & original description: CDS=268-1311 0.04 OrthoFinder output from all 47 species
Azfi_s0056.g034193 TBL10 not classified & original description: CDS=52-624 0.03 OrthoFinder output from all 47 species
Azfi_s0061.g034871 TBL25 not classified & original description: CDS=197-1354 0.03 OrthoFinder output from all 47 species
Azfi_s0121.g046854 TBL16 not classified & original description: CDS=76-1164 0.05 OrthoFinder output from all 47 species
Cba_g05722 TBL25 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g37079 TBL23 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g59702 TBL26 mannan O-acetyltransferase *(MOAT) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G104400.1 TBL5, Ceric.01G104400 polysaccharide O-acetyltransferase *(TBR) & original... 0.06 OrthoFinder output from all 47 species
Ceric.18G036100.1 TBL25, Ceric.18G036100 not classified & original description: pacid=50621273... 0.03 OrthoFinder output from all 47 species
Ceric.27G011100.1 TBL13, Ceric.27G011100 not classified & original description: pacid=50604886... 0.03 OrthoFinder output from all 47 species
Ceric.38G021300.1 TBL2, Ceric.38G021300 polysaccharide O-acetyltransferase *(TBR) & original... 0.04 OrthoFinder output from all 47 species
Dac_g02252 TBL23 mannan O-acetyltransferase *(MOAT) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g08348 TBL25 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g22812 YLS7, TBL17 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g35664 TBL27 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g01624 TBL26 mannan O-acetyltransferase *(MOAT) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g04740 TBL12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05372 TBL26 mannan O-acetyltransferase *(MOAT) & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g08945 TBL25 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21126 TBL1 polysaccharide O-acetyltransferase *(TBR) & original... 0.02 OrthoFinder output from all 47 species
Dde_g26018 TBL5 polysaccharide O-acetyltransferase *(TBR) & original... 0.07 OrthoFinder output from all 47 species
Dde_g30693 TBL2 polysaccharide O-acetyltransferase *(TBR) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01010030001 TBL7 Protein trichome berefringence-like 7 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01015054001 TBL16 Protein trichome birefringence-like 16 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01019502001 TBL23 Protein trichome birefringence-like 23 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01030282001 TBL35 Protein trichome birefringence-like 35 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01032800001 ESK1, TBL29 Cell wall.hemicellulose.xylan.modification and... 0.05 OrthoFinder output from all 47 species
GSVIVT01035039001 TBL4 Protein trichome birefringence-like 4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_23681 YLS7, TBL17 Protein trichome birefringence-like 18 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os01g30970.1 TBL8, LOC_Os01g30970 Protein trichome birefringence-like 8 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
LOC_Os01g61460.1 ESK1, TBL29,... xylan O-acetyltransferase (XOAT) 0.03 OrthoFinder output from all 47 species
LOC_Os05g35190.1 TBL7, LOC_Os05g35190 Protein trichome berefringence-like 7 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os06g12850.1 TBL27, LOC_Os06g12850 Protein ALTERED XYLOGLUCAN 4 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os06g12870.1 TBL27, LOC_Os06g12870 xyloglucan O-acetyltransferase (AXY4) 0.03 OrthoFinder output from all 47 species
LOC_Os06g16170.1 TBL21, LOC_Os06g16170 Protein trichome birefringence-like 20 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os06g44900.1 TBL5, LOC_Os06g44900 Protein trichome birefringence-like 5 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os07g46230.1 TBL10, LOC_Os07g46230 Protein trichome birefringence-like 11 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os11g01570.1 TBL34, LOC_Os11g01570 xylan O-acetyltransferase (XOAT) 0.02 OrthoFinder output from all 47 species
MA_10436708g0010 TBL6 Protein trichome birefringence-like 6 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_128999g0010 TBL11 Protein trichome birefringence-like 11 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_69588g0010 TBL14 Protein trichome birefringence-like 14 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Msp_g15165 TBL11 rhamnogalacturonan-I O-acetyltransferase *(TBL) &... 0.02 OrthoFinder output from all 47 species
Msp_g37893 TBL13 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g19102 TBL23 mannan O-acetyltransferase *(MOAT) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g22787 TBL16 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02267 TBL14 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g09459 TBL25 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g08526 TBL11 rhamnogalacturonan-I O-acetyltransferase *(TBL) &... 0.02 OrthoFinder output from all 47 species
Pnu_g10001 TBL7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03090 TBL7 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g11644 TBL25 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g14412 TBL16 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16905 TBL21 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g17420 TBL27 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18523 TBL26 mannan O-acetyltransferase *(MOAT) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g56592 TBL14 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g12879 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g14388 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc02g089680.4.1 TBL19, Solyc02g089680 Protein trichome birefringence-like 19 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Solyc10g078910.3.1 TBR, Solyc10g078910 Protein trichome birefringence OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Spa_g17303 TBL13 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g49334 TBL25 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g00830 YLS7, TBL17 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06009 TBL7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10211 TBL25 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g10212 TBL21 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g14627 TBL25 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e016007_P001 TBR, Zm00001e016007 Protein trichome birefringence OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e023925_P001 ESK1, TBL29,... Protein ESKIMO 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e030411_P001 TBL5, Zm00001e030411 Protein trichome birefringence-like 5 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e039345_P001 TBL11, Zm00001e039345 rhamnogalacturonan-I O-acetyltransferase (TBL) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006810 transport IEP HCCA
BP GO:0006835 dicarboxylic acid transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015740 C4-dicarboxylate transport IEP HCCA
BP GO:0015743 malate transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR026057 PC-Esterase 2 225
No external refs found!