Solyc01g012670.3.1 (ATDCL2, DCL2, Solyc01g012670)

Aliases : ATDCL2, DCL2, Solyc01g012670

Description : Endoribonuclease Dicer homolog 2 OS=Arabidopsis thaliana (sp|q3ebc8|dcl2_arath : 95.9)

Gene families : OG0010769 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0010769_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc01g012670.3.1

Target	Alias	Description	ECC score	Gene Family Method
Solyc01g011520.2.1	ATDCL2, DCL2,...	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Solyc01g012590.1.1	Solyc01g012590	no hits & (original description: none)	0.06	OrthoFinder output from all 47 species
Solyc01g013790.1.1	ATDCL2, DCL2,...	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Solyc01g013810.1.1	ATDCL2, DCL2,...	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Solyc01g013860.1.1	ATDCL2, DCL2,...	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004518	nuclease activity	None	Extended
MF	GO:0004519	endonuclease activity	None	Extended
MF	GO:0004521	endoribonuclease activity	None	Extended
MF	GO:0004525	ribonuclease III activity	IEA	Interproscan
MF	GO:0004540	ribonuclease activity	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0016891	endoribonuclease activity, producing 5'-phosphomonoesters	None	Extended
MF	GO:0016893	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	None	Extended
MF	GO:0032296	double-stranded RNA-specific ribonuclease activity	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000999	RNase_III_dom	13	181

External Links

No external refs found!

Solyc01g012670.3.1 (ATDCL2, DCL2, Solyc01g012670)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation