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  5. Solyc01g010460.4.1

Solyc01g010460.4.1 (Solyc01g010460)


Aliases : Solyc01g010460

Description : Protein PTST homolog 2, chloroplastic OS=Arabidopsis thaliana (sp|q9lfy0|ptst2_arath : 105.0)


Gene families : OG0007087 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007087_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g010460.4.1
Cluster HCCA: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
Ceric.23G010100.1 Ceric.23G010100 not classified & original description: pacid=50611205... 0.02 OrthoFinder output from all 47 species
Dde_g47992 No alias starch granule initiation factor *(PTST2) & original... 0.02 OrthoFinder output from all 47 species
Ore_g15658 No alias starch granule initiation factor *(PTST2) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g41235 No alias starch granule initiation factor *(PTST2) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0130.g022059 No alias starch granule initiation factor *(PTST2) & original... 0.04 OrthoFinder output from all 47 species
Spa_g19105 No alias starch granule initiation factor *(PTST2) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e005280_P002 Zm00001e005280 starch granule initiation factor (PTST2) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!