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  5. Solyc01g009240.4.1

Solyc01g009240.4.1 (Solyc01g009240)


Aliases : Solyc01g009240

Description : Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 223.9) & Beta-xylosidase/alpha-L-arabinofuranosidase 2 OS=Medicago sativa subsp. varia (sp|a5jtq3|xyl2_medsv : 149.0)


Gene families : OG0000436 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000436_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g009240.4.1

Target Alias Description ECC score Gene Family Method Actions
AT5G04885 No alias Glycosyl hydrolase family protein 0.03 OrthoFinder output from all 47 species
Als_g07729 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g02846 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g24165 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01037542001 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.03 OrthoFinder output from all 47 species
Lfl_g21009 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Mp1g11940.1 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.02 OrthoFinder output from all 47 species
Ore_g03950 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g27839 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15636 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g17909 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009536 plastid IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR002772 Glyco_hydro_3_C 413 622
IPR001764 Glyco_hydro_3_N 48 376
No external refs found!