Solyc01g006180.4.1 (Solyc01g006180)

Aliases : Solyc01g006180

Description : GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN 2, chloroplastic OS=Arabidopsis thaliana (sp|q8w4i6|bpg2_arath : 429.0)

Gene families : OG0005393 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005393_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc01g006180.4.1
Cluster	HCCA: Cluster_19

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00003p00268300	evm_27.TU.AmTr_v1...	GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN...	0.02	OrthoFinder output from all 47 species
AMTR_s00064p00187430	evm_27.TU.AmTr_v1...	GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN...	0.03	OrthoFinder output from all 47 species
AT4G10620	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.04	OrthoFinder output from all 47 species
Adi_g045219	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g045220	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g086147	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g15862	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.06G070100.1	Ceric.06G070100	not classified & original description: pacid=50620078...	0.06	OrthoFinder output from all 47 species
Cre07.g315400	No alias	GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN...	0.02	OrthoFinder output from all 47 species
Ehy_g14660	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01025382001	No alias	GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN...	0.06	OrthoFinder output from all 47 species
Gb_19145	No alias	GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN...	0.04	OrthoFinder output from all 47 species
LOC_Os09g19980.1	LOC_Os09g19980	GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN...	0.07	OrthoFinder output from all 47 species
Msp_g09396	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g57533	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g29882	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g28413	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e024057_P001	Zm00001e024057	GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001522	pseudouridine synthesis	IEP	HCCA
MF	GO:0003676	nucleic acid binding	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0006397	mRNA processing	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
MF	GO:0008270	zinc ion binding	IEP	HCCA
BP	GO:0009451	RNA modification	IEP	HCCA
MF	GO:0010181	FMN binding	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
BP	GO:0016071	mRNA metabolic process	IEP	HCCA
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	HCCA
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	HCCA
BP	GO:0042254	ribosome biogenesis	IEP	HCCA
BP	GO:0044085	cellular component biogenesis	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA
MF	GO:0051536	iron-sulfur cluster binding	IEP	HCCA
MF	GO:0051540	metal cluster binding	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006073	GTP-bd	327	401

External Links

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Solyc01g006180.4.1 (Solyc01g006180)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation