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Aliases : Solyc01g006010
Description : no hits & (original description: none)
Gene families : OG0000568 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000568_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00024p00180690 | evm_27.TU.AmTr_v1... | Splicing factor-like protein 1 OS=Arabidopsis thaliana | 0.06 | OrthoFinder output from all 47 species | |
| AMTR_s00078p00155240 | evm_27.TU.AmTr_v1... | RNA processing.RNA splicing.U2-type-intron-specific... | 0.08 | OrthoFinder output from all 47 species | |
| AT3G32940 | No alias | RNA-binding KH domain-containing protein | 0.06 | OrthoFinder output from all 47 species | |
| AT5G51300 | No alias | splicing factor-related | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g087207 | No alias | pre-mRNA splicing factor *(SF1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g07951 | No alias | pre-mRNA splicing factor *(SF1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g07374 | No alias | pre-mRNA splicing factor *(SF1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g11258 | No alias | pre-mRNA splicing factor *(SF1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0073.g037110 | No alias | pre-mRNA splicing factor *(SF1) & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0111.g045639 | No alias | pre-mRNA splicing factor *(SF1) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.01G107100.1 | Ceric.01G107100 | pre-mRNA splicing factor *(SF1) & original description:... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.06G040400.1 | Ceric.06G040400 | pre-mRNA splicing factor *(SF1) & original description:... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.21G060800.1 | Ceric.21G060800 | pre-mRNA splicing factor *(SF1) & original description:... | 0.07 | OrthoFinder output from all 47 species | |
| Ceric.25G061400.1 | Ceric.25G061400 | pre-mRNA splicing factor *(SF1) & original description:... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.28G060200.1 | Ceric.28G060200 | pre-mRNA splicing factor *(SF1) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Cre09.g386731 | No alias | RNA processing.RNA splicing.U2-type-intron-specific... | 0.06 | OrthoFinder output from all 47 species | |
| Dcu_g08280 | No alias | pre-mRNA splicing factor *(SF1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g09001 | No alias | pre-mRNA splicing factor *(SF1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g09594 | No alias | pre-mRNA splicing factor *(SF1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g10028 | No alias | pre-mRNA splicing factor *(SF1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g23974 | No alias | pre-mRNA splicing factor *(SF1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01025406001 | No alias | Splicing factor-like protein 1 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| Gb_09287 | No alias | pre-mRNA splicing factor (SF1) | 0.08 | OrthoFinder output from all 47 species | |
| Gb_19921 | No alias | pre-mRNA splicing factor (SF1) | 0.12 | OrthoFinder output from all 47 species | |
| LOC_Os08g01070.2 | LOC_Os08g01070 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| Len_g10453 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g04920 | No alias | pre-mRNA splicing factor *(SF1) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g29785 | No alias | pre-mRNA splicing factor *(SF1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_15045g0010 | No alias | pre-mRNA splicing factor (SF1) | 0.05 | OrthoFinder output from all 47 species | |
| MA_160895g0010 | No alias | pre-mRNA splicing factor (SF1) | 0.02 | OrthoFinder output from all 47 species | |
| MA_8555g0010 | No alias | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| Mp7g15050.1 | No alias | pre-mRNA splicing factor (SF1) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g15402 | No alias | pre-mRNA splicing factor *(SF1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g19076 | No alias | pre-mRNA splicing factor *(SF1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g04834 | No alias | pre-mRNA splicing factor *(SF1) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g16656 | No alias | pre-mRNA splicing factor *(SF1) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g31502 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g31857 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g40492 | No alias | pre-mRNA splicing factor *(SF1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g07459 | No alias | pre-mRNA splicing factor *(SF1) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g29287 | No alias | pre-mRNA splicing factor *(SF1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0024.g009059 | No alias | pre-mRNA splicing factor *(SF1) & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g07779 | No alias | pre-mRNA splicing factor *(SF1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g45333 | No alias | pre-mRNA splicing factor *(SF1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e008383_P001 | Zm00001e008383 | pre-mRNA splicing factor (SF1) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e040741_P001 | Zm00001e040741 | pre-mRNA splicing factor (SF1) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003712 | transcription coregulator activity | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| CC | GO:0005643 | nuclear pore | IEP | HCCA |
| CC | GO:0005667 | transcription regulator complex | IEP | HCCA |
| CC | GO:0005669 | transcription factor TFIID complex | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006352 | DNA-templated transcription initiation | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| CC | GO:0016592 | mediator complex | IEP | HCCA |
| MF | GO:0017056 | structural constituent of nuclear pore | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0051169 | nuclear transport | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| CC | GO:0090575 | RNA polymerase II transcription regulator complex | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR032570 | SF1-HH | 69 | 167 |
| No external refs found! |