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  5. Solyc01g005970.3.1

Solyc01g005970.3.1 (Solyc01g005970)


Aliases : Solyc01g005970

Description : phenylpropanoid biosynthesis regulator (SAGL1)


Gene families : OG0000469 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000469_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Solyc01g005970.3.1
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
Adi_g111859 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g02525 No alias substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Aob_g00844 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Aop_g04885 No alias substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Ehy_g15274 No alias substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
GSVIVT01025417001 No alias F-box/kelch-repeat protein At1g55270 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
LOC_Os10g26990.1 LOC_Os10g26990 phenylpropanoid biosynthesis regulator (SAGL1) 0.05 OrthoFinder output from all 47 species
MA_100608g0010 No alias phenylpropanoid biosynthesis regulator (SAGL1) 0.03 OrthoFinder output from all 47 species
MA_135002g0010 SKIP4 F-box/kelch-repeat protein SKIP4 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp2g26320.1 No alias F-box/kelch-repeat protein At1g55270 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Msp_g02030 No alias substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Msp_g12174 No alias substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.03 OrthoFinder output from all 47 species
Nbi_g11761 No alias substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Spa_g02126 No alias substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0006904 vesicle docking involved in exocytosis IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
BP GO:0022406 membrane docking IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0048278 vesicle docking IEP HCCA
BP GO:0051640 organelle localization IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140029 exocytic process IEP HCCA
BP GO:0140056 organelle localization by membrane tethering IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 78 114
IPR006652 Kelch_1 216 262
IPR006652 Kelch_1 172 212
No external refs found!