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  5. Solyc01g005900.2.1

Solyc01g005900.2.1 (Solyc01g005900)


Aliases : Solyc01g005900

Description : amino acid transporter (LAT)


Gene families : OG0000891 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000891_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g005900.2.1

Target Alias Description ECC score Gene Family Method Actions
Aob_g08979 No alias amino acid transporter *(LAT) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g00809 No alias amino acid transporter *(LAT) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01022800001 No alias Solute transport.carrier-mediated transport.APC... 0.04 OrthoFinder output from all 47 species
GSVIVT01023972001 No alias Solute transport.carrier-mediated transport.APC... 0.04 OrthoFinder output from all 47 species
GSVIVT01025423001 No alias Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
Gb_41826 No alias amino acid transporter (LAT) 0.06 OrthoFinder output from all 47 species
LOC_Os02g47210.1 LOC_Os02g47210 amino acid transporter (LAT) 0.03 OrthoFinder output from all 47 species
LOC_Os03g25840.1 LOC_Os03g25840 amino acid transporter (LAT) 0.06 OrthoFinder output from all 47 species
LOC_Os03g25920.1 LOC_Os03g25920 amino acid transporter (LAT) 0.03 OrthoFinder output from all 47 species
MA_192637g0010 No alias amino acid transporter (LAT) 0.04 OrthoFinder output from all 47 species
MA_24651g0010 No alias amino acid transporter (LAT) 0.02 OrthoFinder output from all 47 species
Msp_g09316 No alias amino acid transporter *(LAT) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc08g005540.2.1 Solyc08g005540 amino acid transporter (LAT) 0.07 OrthoFinder output from all 47 species
Spa_g53432 No alias amino acid transporter *(LAT) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g03954 No alias amino acid transporter *(LAT) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e001815_P001 Zm00001e001815 amino acid transporter (LAT) 0.02 OrthoFinder output from all 47 species
Zm00001e001820_P001 Zm00001e001820 amino acid transporter (LAT) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA

No InterPro domains available for this sequence

No external refs found!