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  5. Solyc00g500293.1.1

Solyc00g500293.1.1 (PSBK, Solyc00g500293)


Aliases : PSBK, Solyc00g500293

Description : component PsbI of PS-II reaction center complex. component PsbK of PS-II complex


Gene families : OG0007203 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007203_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc00g500293.1.1
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
ATCG00070 PSBK photosystem II reaction center protein K precursor 0.43 OrthoFinder output from all 47 species
Ceric.01G057000.1 PSBI, Ceric.01G057000 component *(PsbI) of PS-II reaction center complex &... 0.26 OrthoFinder output from all 47 species
Ceric.01G057100.1 PSBK, Ceric.01G057100 component *(PsbK) of PS-II complex & original... 0.14 OrthoFinder output from all 47 species
Ceric.01G104900.1 PSBK, Ceric.01G104900 component *(PsbK) of PS-II complex & original... 0.14 OrthoFinder output from all 47 species
Ceric.01G105000.1 PSBI, Ceric.01G105000 component *(PsbI) of PS-II reaction center complex &... 0.26 OrthoFinder output from all 47 species
Ceric.02G012100.1 PSBI, Ceric.02G012100 component *(PsbI) of PS-II reaction center complex &... 0.26 OrthoFinder output from all 47 species
Ceric.05G040800.1 PSBK, Ceric.05G040800 component *(PsbK) of PS-II complex & original... 0.06 OrthoFinder output from all 47 species
Ceric.12G058300.1 PSBK, Ceric.12G058300 component *(PsbK) of PS-II complex & original... 0.14 OrthoFinder output from all 47 species
Ceric.13G052800.1 PSBI, Ceric.13G052800 component *(PsbI) of PS-II reaction center complex &... 0.26 OrthoFinder output from all 47 species
Ceric.13G052900.1 PSBK, Ceric.13G052900 component *(PsbK) of PS-II complex & original... 0.03 OrthoFinder output from all 47 species
Ceric.1Z023200.1 PSBI, Ceric.1Z023200 component *(PsbI) of PS-II reaction center complex &... 0.26 OrthoFinder output from all 47 species
Ceric.1Z116900.1 PSBK, Ceric.1Z116900 component *(PsbK) of PS-II complex & original... 0.12 OrthoFinder output from all 47 species
Ceric.1Z117000.1 PSBI, Ceric.1Z117000 component *(PsbI) of PS-II reaction center complex &... 0.26 OrthoFinder output from all 47 species
Ceric.26G042600.1 PSBK, Ceric.26G042600 component *(PsbK) of PS-II complex & original... 0.14 OrthoFinder output from all 47 species
Ceric.29G005500.1 PSBI, Ceric.29G005500 component *(PsbI) of PS-II reaction center complex &... 0.26 OrthoFinder output from all 47 species
Ceric.29G005600.1 PSBK, Ceric.29G005600 component *(PsbK) of PS-II complex & original... 0.14 OrthoFinder output from all 47 species
GSVIVT01037458001 No alias Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.08 OrthoFinder output from all 47 species
LOC_Os02g24642.1 LOC_Os02g24642 component PsbK of PS-II complex 0.3 OrthoFinder output from all 47 species
LOC_Os04g16866.1 LOC_Os04g16866 component PsbK of PS-II complex 0.43 OrthoFinder output from all 47 species
LOC_Os10g41696.1 LOC_Os10g41696 component PsbK of PS-II complex 0.42 OrthoFinder output from all 47 species
Smo137749 No alias Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.04 OrthoFinder output from all 47 species
Zm00001e042045_P001 PSBK, Zm00001e042045 component PsbK of PS-II complex 0.12 OrthoFinder output from all 47 species
Zm00001e042111_P001 PSBK, Zm00001e042111 component PsbK of PS-II complex 0.12 OrthoFinder output from all 47 species
Zm00001e042159_P001 PSBK, Zm00001e042159 component PsbK of PS-II complex 0.09 OrthoFinder output from all 47 species
Zm00001e042175_P001 PSBK, Zm00001e042175 component PsbK of PS-II complex 0.12 OrthoFinder output from all 47 species
Zm00001e042230_P001 PSBK, Zm00001e042230 component PsbK of PS-II complex 0.12 OrthoFinder output from all 47 species
Zm00001e042357_P001 PSBK, Zm00001e042357 component PsbK of PS-II complex 0.12 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009523 photosystem II IEA Interproscan
CC GO:0009539 photosystem II reaction center IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009579 thylakoid IEP HCCA
BP GO:0009767 photosynthetic electron transport chain IEP HCCA
BP GO:0009772 photosynthetic electron transport in photosystem II IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015977 carbon fixation IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
MF GO:0016168 chlorophyll binding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016984 ribulose-bisphosphate carboxylase activity IEP HCCA
BP GO:0019684 photosynthesis, light reaction IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEP HCCA
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR003687 PSII_PsbK 22 57
IPR003686 PSII_PsbI 79 113
No external refs found!