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  5. Solyc00g500241.1.1

Solyc00g500241.1.1 (CCB452, Solyc00g500241)


Aliases : CCB452, Solyc00g500241

Description : Cytochrome c biogenesis CcmF C-terminal-like mitochondrial protein OS=Arabidopsis thaliana (sp|p93286|ccmfc_arath : 359.0)


Gene families : OG0010200 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0010200_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc00g500241.1.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00228710 CCB452,... Cytochrome c biogenesis CcmF C-terminal-like... 0.08 OrthoFinder output from all 47 species
AT2G07815 No alias BEST Arabidopsis thaliana protein match is: cytochrome C... 0.11 OrthoFinder output from all 47 species
ATMG00180 CCB452 cytochrome C biogenesis 452 0.11 OrthoFinder output from all 47 species
Gb_01757 CCB452 Cytochrome c biogenesis CcmF C-terminal-like... 0.11 OrthoFinder output from all 47 species
Zm00001e042200_P001 CCB452, Zm00001e042200 Cytochrome c biogenesis CcmF C-terminal-like... 0.03 OrthoFinder output from all 47 species
Zm00001e042201_P001 CCB452, Zm00001e042201 Cytochrome c biogenesis CcmF C-terminal-like... 0.02 OrthoFinder output from all 47 species
Zm00001e042314_P001 CCB452, Zm00001e042314 Cytochrome c biogenesis CcmF C-terminal-like... 0.02 OrthoFinder output from all 47 species
Zm00001e042392_P001 CCB452, Zm00001e042392 Cytochrome c biogenesis CcmF C-terminal-like... 0.02 OrthoFinder output from all 47 species
Zm00001e042398_P001 CCB452, Zm00001e042398 Cytochrome c biogenesis CcmF C-terminal-like... 0.02 OrthoFinder output from all 47 species
Zm00001e042422_P001 CCB452, Zm00001e042422 Cytochrome c biogenesis CcmF C-terminal-like... 0.02 OrthoFinder output from all 47 species
Zm00001e042430_P001 CCB452, Zm00001e042430 Cytochrome c biogenesis CcmF C-terminal-like... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003954 NADH dehydrogenase activity IEP HCCA
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP HCCA
MF GO:0004129 cytochrome-c oxidase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009060 aerobic respiration IEP HCCA
MF GO:0015002 obsolete heme-copper terminal oxidase activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
BP GO:0015980 energy derivation by oxidation of organic compounds IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0045333 cellular respiration IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR032523 CcmF_C 513 589
No external refs found!