1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc00g500172.1.1

Solyc00g500172.1.1 (NAD4, Solyc00g500172)


Aliases : NAD4, Solyc00g500172

Description : NADH-ubiquinone oxidoreductase chain 4 OS=Brassica campestris (sp|q04050|nu4m_bracm : 268.0)


Gene families : OG0004828 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004828_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc00g500172.1.1
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00060p00157590 evm_27.TU.AmTr_v1... No description available 0.06 OrthoFinder output from all 47 species
ATMG00580 NAD4 NADH dehydrogenase subunit 4 0.14 OrthoFinder output from all 47 species
Als_g59558 NAD4 component *(ND4/NQO13) of NADH dehydrogenase proton... 0.07 OrthoFinder output from all 47 species
Ceric.1Z123000.1 NAD4, Ceric.1Z123000 not classified & original description: pacid=50617108... 0.07 OrthoFinder output from all 47 species
Ceric.1Z196200.1 NAD4, Ceric.1Z196200 not classified & original description: pacid=50586507... 0.07 OrthoFinder output from all 47 species
Ceric.1Z237200.1 NAD4, Ceric.1Z237200 not classified & original description: pacid=50569352... 0.07 OrthoFinder output from all 47 species
Ceric.1Z247100.1 NAD4, Ceric.1Z247100 not classified & original description: pacid=50628393... 0.07 OrthoFinder output from all 47 species
Ceric.1Z258400.1 NAD4, Ceric.1Z258400 not classified & original description: pacid=50613711... 0.07 OrthoFinder output from all 47 species
Ceric.1Z286300.1 NAD4, Ceric.1Z286300 not classified & original description: pacid=50607883... 0.03 OrthoFinder output from all 47 species
Ceric.1Z287700.1 NAD4, Ceric.1Z287700 not classified & original description: pacid=50600406... 0.07 OrthoFinder output from all 47 species
Ceric.1Z293000.1 NAD4, Ceric.1Z293000 not classified & original description: pacid=50576966... 0.07 OrthoFinder output from all 47 species
Ceric.1Z294300.1 NAD4, Ceric.1Z294300 not classified & original description: pacid=50582099... 0.03 OrthoFinder output from all 47 species
Ceric.1Z296600.1 NAD4, Ceric.1Z296600 not classified & original description: pacid=50611586... 0.03 OrthoFinder output from all 47 species
Ceric.1Z296700.1 NAD4, Ceric.1Z296700 not classified & original description: pacid=50618913... 0.03 OrthoFinder output from all 47 species
Ceric.1Z298600.1 NAD4, Ceric.1Z298600 not classified & original description: pacid=50628418... 0.03 OrthoFinder output from all 47 species
Ceric.1Z302000.1 NAD4, Ceric.1Z302000 not classified & original description: pacid=50573511... 0.03 OrthoFinder output from all 47 species
Ceric.1Z303000.1 NAD4, Ceric.1Z303000 not classified & original description: pacid=50639163... 0.07 OrthoFinder output from all 47 species
Ceric.1Z307100.1 NAD4, Ceric.1Z307100 not classified & original description: pacid=50632823... 0.03 OrthoFinder output from all 47 species
Ceric.1Z308300.1 NAD4, Ceric.1Z308300 not classified & original description: pacid=50634939... 0.08 OrthoFinder output from all 47 species
Ceric.1Z312200.1 NAD4, Ceric.1Z312200 not classified & original description: pacid=50588663... 0.03 OrthoFinder output from all 47 species
Ceric.1Z312700.1 NAD4, Ceric.1Z312700 not classified & original description: pacid=50573471... 0.07 OrthoFinder output from all 47 species
Gb_07659 NAD4 NADH-ubiquinone oxidoreductase chain 4 OS=Brassica... 0.04 OrthoFinder output from all 47 species
LOC_Os12g34094.1 NAD4, LOC_Os12g34094 NADH-ubiquinone oxidoreductase chain 4 OS=Triticum... 0.07 OrthoFinder output from all 47 species
Nbi_g17169 NAD4 component *(ND4/NQO13) of NADH dehydrogenase proton... 0.14 OrthoFinder output from all 47 species
Pp3c2_30660V3.1 Pp3c2_30660 NADH dehydrogenase subunit 4 0.03 OrthoFinder output from all 47 species
Sam_g05376 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13523 No alias component *(ND4/NQO13) of NADH dehydrogenase proton... 0.04 OrthoFinder output from all 47 species
Spa_g54446 NAD4 component *(ND4/NQO13) of NADH dehydrogenase proton... 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004129 cytochrome-c oxidase activity IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009060 aerobic respiration IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
BP GO:0015980 energy derivation by oxidation of organic compounds IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0045333 cellular respiration IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000260 NADH4_N 83 144
No external refs found!