1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc00g500041.1.1

Solyc00g500041.1.1 (NDHA, Solyc00g500041)


Aliases : NDHA, Solyc00g500041

Description : component NdhA of NDH membrane subcomplex M


Gene families : OG0002562 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002562_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc00g500041.1.1
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AT2G07785 No alias NADH dehydrogenase family protein 0.04 OrthoFinder output from all 47 species
ATCG01100 NDHA NADH dehydrogenase family protein 0.34 OrthoFinder output from all 47 species
ATMG01275 NAD1, NAD1A, ND1 NADH dehydrogenase 1A 0.03 OrthoFinder output from all 47 species
Aev_g43123 NDHA component *(NdhA) of NDH membrane subcomplex M &... 0.27 OrthoFinder output from all 47 species
Ala_g00418 NDHA not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g39522 NAD1, NAD1A, ND1 component *(ND1/NQO8) of NADH dehydrogenase proton... 0.05 OrthoFinder output from all 47 species
Azfi_s0724.g083812 NDHA not classified & original description: CDS=1-351 0.06 OrthoFinder output from all 47 species
Cba_g37077 NDHA not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g74468 NDHA component *(NdhA) of NDH membrane subcomplex M &... 0.08 OrthoFinder output from all 47 species
Ceric.02G090700.1 Ceric.02G090700 not classified & original description: pacid=50586236... 0.08 OrthoFinder output from all 47 species
Ceric.02G090800.1 Ceric.02G090800 not classified & original description: pacid=50586151... 0.22 OrthoFinder output from all 47 species
Ceric.05G047000.1 NDHA, Ceric.05G047000 not classified & original description: pacid=50577203... 0.03 OrthoFinder output from all 47 species
Ceric.09G082400.1 NDHA, Ceric.09G082400 not classified & original description: pacid=50586766... 0.12 OrthoFinder output from all 47 species
Ceric.19G010100.1 NDHA, Ceric.19G010100 not classified & original description: pacid=50575878... 0.1 OrthoFinder output from all 47 species
Ceric.1Z020500.1 NDHA, Ceric.1Z020500 not classified & original description: pacid=50586361... 0.03 OrthoFinder output from all 47 species
Ceric.23G031900.1 NDHA, Ceric.23G031900 not classified & original description: pacid=50610252... 0.08 OrthoFinder output from all 47 species
Ceric.35G068100.1 NDHA, Ceric.35G068100 not classified & original description: pacid=50581258... 0.34 OrthoFinder output from all 47 species
Dde_g43454 NDHA component *(NdhA) of NDH membrane subcomplex M &... 0.06 OrthoFinder output from all 47 species
GSVIVT01006663001 No alias NADH-ubiquinone oxidoreductase chain 1 OS=Petunia hybrida 0.09 OrthoFinder output from all 47 species
Gb_28455 NDHA component NdhE of NDH membrane subcomplex M 0.12 OrthoFinder output from all 47 species
Gb_34382 MATR no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Gb_34383 NAD4 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Gb_35175 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os10g21396.1 NDHA, LOC_Os10g21396 component NdhA of NDH membrane subcomplex M 0.21 OrthoFinder output from all 47 species
Lfl_g11988 NDHA not classified & original description: none 0.11 OrthoFinder output from all 47 species
Mp6g05330.1 NDHA NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic... 0.02 OrthoFinder output from all 47 species
Nbi_g17907 NDHA not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g01966 NDHA not classified & original description: none 0.18 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004411 No alias not classified & original description: CDS=1-381 0.05 OrthoFinder output from all 47 species
Sam_g00616 No alias component *(NdhA) of NDH membrane subcomplex M &... 0.07 OrthoFinder output from all 47 species
Sam_g05123 No alias component *(ND1/NQO8) of NADH dehydrogenase proton... 0.06 OrthoFinder output from all 47 species
Solyc00g094530.1.1 Solyc00g094530 NADH-ubiquinone oxidoreductase chain 1 OS=Petunia... 0.05 OrthoFinder output from all 47 species
Solyc00g118690.1.1 NDHA, Solyc00g118690 NADH-ubiquinone oxidoreductase chain 1 OS=Citrullus... 0.05 OrthoFinder output from all 47 species
Solyc10g018950.1.1 Solyc10g018950 NADH-ubiquinone oxidoreductase chain 1 OS=Petunia... 0.04 OrthoFinder output from all 47 species
Solyc11g021230.1.1 NDHA, Solyc11g021230 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic... 0.05 OrthoFinder output from all 47 species
Spa_g01951 NDHA component *(NdhA) of NDH membrane subcomplex M &... 0.09 OrthoFinder output from all 47 species
Spa_g17768 NDHA component *(ND1/NQO8) of NADH dehydrogenase proton... 0.04 OrthoFinder output from all 47 species
Tin_g45988 NDHA not classified & original description: none 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003954 NADH dehydrogenase activity IEP HCCA
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
CC GO:0031361 obsolete integral component of thylakoid membrane IEP HCCA
BP GO:0031647 regulation of protein stability IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0042301 phosphate ion binding IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP HCCA
BP GO:0050821 protein stabilization IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001694 NADH_UbQ_OxRdtase_su1/FPO 33 355
No external refs found!