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  5. Smo98074

Smo98074 (ATVIIIA, VIIIA)


Aliases : ATVIIIA, VIIIA

Description : Cytoskeleton.microfilament network.myosin microfilament-based motor protein activities.class VIII myosin


Gene families : OG0000203 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000203_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo98074
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AT5G20470 No alias myosin, putative 0.03 OrthoFinder output from all 47 species
Azfi_s0725.g083832 ATXIK, XI-17, XIK not classified & original description: CDS=1-1110 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020614.58 XI-8, XI-B, XIB, ATXIB Myosin-8 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
GSVIVT01036267001 ATXIE, XIE Cytoskeleton.microfilament network.myosin... 0.03 OrthoFinder output from all 47 species
MA_146416g0010 XIF, ATMYO5, ATXIF Myosin-12 OS=Arabidopsis thaliana (sp|f4iru3|myo12_arath : 179.0) 0.03 OrthoFinder output from all 47 species
Sam_g13734 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e016565_P002 Zm00001e016565 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016459 myosin complex IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001609 Myosin_head_motor_dom 58 710
No external refs found!