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  5. Smo98013

Smo98013


Description : Solute transport.carrier-mediated transport.IT superfamily.putative silicon efflux transporter (LSI2-type)


Gene families : OG0000879 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000879_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo98013
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
Adi_g020566 No alias putative silicon efflux transporter *(LSI2) & original... 0.03 OrthoFinder output from all 47 species
Adi_g099053 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g26527 No alias putative silicon efflux transporter *(LSI2) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene09602.t1 Aspi01Gene09602 putative silicon efflux transporter *(LSI2) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene32907.t1 Aspi01Gene32907 putative silicon efflux transporter *(LSI2) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene62927.t1 Aspi01Gene62927 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g32803 No alias putative silicon efflux transporter *(LSI2) & original... 0.02 OrthoFinder output from all 47 species
Cba_g38733 No alias putative silicon efflux transporter *(LSI2) & original... 0.03 OrthoFinder output from all 47 species
Ceric.07G021700.1 Ceric.07G021700 putative silicon efflux transporter *(LSI2) & original... 0.03 OrthoFinder output from all 47 species
Ceric.13G017100.1 Ceric.13G017100 putative silicon efflux transporter *(LSI2) & original... 0.03 OrthoFinder output from all 47 species
Ceric.39G055400.1 Ceric.39G055400 putative silicon efflux transporter *(LSI2) & original... 0.03 OrthoFinder output from all 47 species
Dac_g39943 No alias putative silicon efflux transporter *(LSI2) & original... 0.02 OrthoFinder output from all 47 species
Dac_g45721 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g13476 No alias putative silicon efflux transporter *(LSI2) & original... 0.04 OrthoFinder output from all 47 species
Dcu_g41359 No alias putative silicon efflux transporter *(LSI2) & original... 0.04 OrthoFinder output from all 47 species
Dde_g13050 No alias putative silicon efflux transporter *(LSI2) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g04848 No alias putative silicon efflux transporter *(LSI2) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g28975 No alias putative silicon efflux transporter *(LSI2) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g28976 No alias putative silicon efflux transporter *(LSI2) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01035710001 No alias Solute transport.carrier-mediated transport.IT... 0.04 OrthoFinder output from all 47 species
LOC_Os02g57620.1 LOC_Os02g57620 putative silicon efflux transporter (LSI2) 0.03 OrthoFinder output from all 47 species
LOC_Os03g01700.1 LOC_Os03g01700 putative silicon efflux transporter (LSI2) 0.05 OrthoFinder output from all 47 species
Len_g30065 No alias putative silicon efflux transporter *(LSI2) & original... 0.02 OrthoFinder output from all 47 species
Lfl_g10667 No alias putative silicon efflux transporter *(LSI2) & original... 0.02 OrthoFinder output from all 47 species
Lfl_g33141 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_133755g0010 No alias putative silicon efflux transporter (LSI2) 0.02 OrthoFinder output from all 47 species
Msp_g35621 No alias putative silicon efflux transporter *(LSI2) & original... 0.05 OrthoFinder output from all 47 species
Msp_g42191 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo148775 No alias Solute transport.carrier-mediated transport.IT... 0.07 OrthoFinder output from all 47 species
Solyc03g025350.3.1 Solyc03g025350 putative silicon efflux transporter (LSI2) 0.02 OrthoFinder output from all 47 species
Solyc06g036100.3.1 Solyc06g036100 putative silicon efflux transporter (LSI2) 0.01 OrthoFinder output from all 47 species
Spa_g11339 No alias putative silicon efflux transporter *(LSI2) & original... 0.03 OrthoFinder output from all 47 species
Spa_g13022 No alias putative silicon efflux transporter *(LSI2) & original... 0.03 OrthoFinder output from all 47 species
Spa_g42152 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e000055_P001 Zm00001e000055 putative silicon efflux transporter (LSI2) 0.05 OrthoFinder output from all 47 species
Zm00001e002282_P001 Zm00001e002282 putative silicon efflux transporter (LSI2) 0.04 OrthoFinder output from all 47 species
Zm00001e023569_P001 Zm00001e023569 putative silicon efflux transporter (LSI2) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003796 lysozyme activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0061783 peptidoglycan muralytic activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR004680 Cit_transptr-like_dom 33 469
No external refs found!