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  5. Smo97725

Smo97725


Description : Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.RuBisCo assembly.RAF2 assembly factor


Gene families : OG0002088 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002088_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo97725

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00030920 evm_27.TU.AmTr_v1... Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.03 OrthoFinder output from all 47 species
AT5G51110 No alias Transcriptional coactivator/pterin dehydratase 0.05 OrthoFinder output from all 47 species
Ala_g08845 No alias assembly factor involved in RuBisCo assembly *(RAF2) &... 0.02 OrthoFinder output from all 47 species
Als_g04074 No alias assembly factor involved in RuBisCo assembly *(RAF2) &... 0.04 OrthoFinder output from all 47 species
Aob_g04878 No alias assembly factor involved in RuBisCo assembly *(RAF2) &... 0.03 OrthoFinder output from all 47 species
ChrSy.fgenesh.mRNA.86 No alias RAF2 assembly factor involved in RuBisCo assembly 0.01 OrthoFinder output from all 47 species
Dac_g02570 No alias assembly factor involved in RuBisCo assembly *(RAF2) &... 0.02 OrthoFinder output from all 47 species
GSVIVT01013845001 No alias Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.03 OrthoFinder output from all 47 species
Gb_11396 No alias RAF2 assembly factor involved in RuBisCo assembly 0.03 OrthoFinder output from all 47 species
Len_g16882 No alias assembly factor involved in RuBisCo assembly *(RAF2) &... 0.03 OrthoFinder output from all 47 species
Mp2g24300.1 No alias RAF2 assembly factor involved in RuBisCo assembly 0.03 OrthoFinder output from all 47 species
Msp_g42207 No alias assembly factor involved in RuBisCo assembly *(RAF2) &... 0.04 OrthoFinder output from all 47 species
Nbi_g03969 No alias assembly factor involved in RuBisCo assembly *(RAF2) &... 0.04 OrthoFinder output from all 47 species
Ppi_g04239 No alias assembly factor involved in RuBisCo assembly *(RAF2) &... 0.03 OrthoFinder output from all 47 species
Sam_g06779 No alias assembly factor involved in RuBisCo assembly *(RAF2) &... 0.02 OrthoFinder output from all 47 species
Solyc03g094175.1.1 Solyc03g094175 RAF2 assembly factor involved in RuBisCo assembly 0.02 OrthoFinder output from all 47 species
Solyc03g094177.1.1 Solyc03g094177 RAF2 assembly factor involved in RuBisCo assembly 0.02 OrthoFinder output from all 47 species
Spa_g06443 No alias assembly factor involved in RuBisCo assembly *(RAF2) &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008124 4-alpha-hydroxytetrahydrobiopterin dehydratase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
BP GO:0045454 cell redox homeostasis IEP HCCA
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0051920 peroxiredoxin activity IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:0098809 nitrite reductase activity IEP HCCA
InterPro domains Description Start Stop
IPR001533 Pterin_deHydtase 65 163
No external refs found!