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  5. Smo96927

Smo96927 (EMB2758)


Aliases : EMB2758

Description : Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidopsis thaliana


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo96927
Cluster HCCA: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00259620 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g35030,... 0.02 OrthoFinder output from all 47 species
AMTR_s00022p00075660 No alias Pentatricopeptide repeat-containing protein At2g33680... 0.02 OrthoFinder output from all 47 species
AMTR_s00022p00252600 MEF1 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
AMTR_s00057p00137550 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g36980,... 0.02 OrthoFinder output from all 47 species
AMTR_s00066p00062930 EMB2261,... Pentatricopeptide repeat-containing protein At3g49170,... 0.02 OrthoFinder output from all 47 species
AT3G02010 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.01 OrthoFinder output from all 47 species
Adi_g002777 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g003262 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g003358 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g003796 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g003859 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g004435 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g005379 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g005657 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g006931 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g007371 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g008563 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g012996 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g014360 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g015534 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g016117 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g018615 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g020363 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g023027 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g034302 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g035630 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g035683 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036507 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g048224 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g053630 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g054256 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g057083 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g066534 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g067172 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g067822 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g067856 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g069023 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g079337 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g099180 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g099240 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g099289 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g099342 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g102636 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g32888 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g04109 EMB2758 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g16437 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g22769 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g24034 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g24083 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g25745 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g30893 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g32891 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g36976 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g38174 No alias ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Als_g10792 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18769 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g23879 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g24105 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g32098 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g58582 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g62734 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g63296 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g26948 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g36885 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g37575 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g33117 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g57040 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g70598 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene02296.t1 Aspi01Gene02296 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene57232.t1 Aspi01Gene57232 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene65088.t1 Aspi01Gene65088 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000396 No alias not classified & original description: CDS=1-2745 0.03 OrthoFinder output from all 47 species
Azfi_s0040.g026628 No alias not classified & original description: CDS=1-2499 0.03 OrthoFinder output from all 47 species
Azfi_s0652.g081079 No alias not classified & original description: CDS=1-2169 0.03 OrthoFinder output from all 47 species
Azfi_s3922.g117339 No alias not classified & original description: CDS=1-831 0.01 OrthoFinder output from all 47 species
Cba_g04659 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g05330 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07200 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20865 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g21792 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g28001 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g45101 OTP82 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g75809 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.04G103800.1 Ceric.04G103800 not classified & original description: pacid=50630749... 0.02 OrthoFinder output from all 47 species
Ceric.09G007000.1 Ceric.09G007000 not classified & original description: pacid=50586983... 0.01 OrthoFinder output from all 47 species
Ceric.09G010600.1 CRR22, Ceric.09G010600 ssDNA-binding protein *(OSB) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.20G079700.1 DOT4, Ceric.20G079700 ssDNA-binding protein *(OSB) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.29G083600.1 Ceric.29G083600 ssDNA-binding protein *(OSB) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.35G064900.1 Ceric.35G064900 not classified & original description: pacid=50581299... 0.03 OrthoFinder output from all 47 species
Cre12.g483700 OSB4 Cell cycle.organelle machineries.DNA... 0.01 OrthoFinder output from all 47 species
Dac_g24639 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g35456 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g04207 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g04808 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05681 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06448 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07075 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07145 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g07698 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g07745 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08224 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08274 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08284 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16545 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g17231 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g17290 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g50046 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g51083 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03570 EMB2758 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g06719 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g22836 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g06009 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g09249 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12280 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13211 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g24017 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g24574 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26389 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_33335 CRR22 Pentatricopeptide repeat-containing protein DOT4,... 0.01 OrthoFinder output from all 47 species
Gb_36775 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Gb_39514 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.01 OrthoFinder output from all 47 species
LOC_Os02g18810.1 LOC_Os02g18810 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
LOC_Os03g52475.1 LOC_Os03g52475 Pentatricopeptide repeat-containing protein At3g28660... 0.02 OrthoFinder output from all 47 species
LOC_Os05g38190.2 LOC_Os05g38190 Pentatricopeptide repeat-containing protein At2g27610... 0.02 OrthoFinder output from all 47 species
LOC_Os06g29800.1 LOC_Os06g29800 Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
LOC_Os09g24680.1 LOC_Os09g24680 Pentatricopeptide repeat-containing protein At1g74600,... 0.01 OrthoFinder output from all 47 species
Len_g02898 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g05435 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g07790 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g17743 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g25860 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g03305 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06187 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g06599 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g06697 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06716 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07826 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g08093 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g09042 OTP80 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g11894 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g14903 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g15219 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g17485 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g25656 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g26497 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g33055 DOT4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g36746 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10311934g0010 MEF22 Pentatricopeptide repeat-containing protein At1g15510,... 0.01 OrthoFinder output from all 47 species
MA_107723g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.01 OrthoFinder output from all 47 species
MA_124907g0010 CRR22 Pentatricopeptide repeat-containing protein At2g13600... 0.01 OrthoFinder output from all 47 species
MA_480955g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.01 OrthoFinder output from all 47 species
MA_6527g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
MA_7907g0020 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.01 OrthoFinder output from all 47 species
Msp_g03121 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g03562 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g03892 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g26145 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g41108 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g46446 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g06314 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g22141 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g21816 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g01995 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13291 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g19619 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57706 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63647 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g02439 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g23560 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g27073 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06423 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g09525 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g10206 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g10335 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g12921 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g18089 MEF19 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g18862 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53684 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g59292 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g61239 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0133.g022243 No alias not classified & original description: CDS=1-1908 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s1579.g028098 No alias not classified & original description: CDS=1-249 0.02 OrthoFinder output from all 47 species
Sam_g06616 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g08926 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc10g005090.3.1 Solyc10g005090 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Tin_g03531 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g06477 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06592 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g06631 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g06875 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10298 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13752 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g14567 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g17885 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20335 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23111 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g24970 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26549 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g30419 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g37393 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44852 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e003284_P001 Zm00001e003284 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Zm00001e015695_P001 Zm00001e015695 Pentatricopeptide repeat-containing protein At4g16835,... 0.03 OrthoFinder output from all 47 species
Zm00001e020567_P001 Zm00001e020567 RNA editing factor (MEF7) 0.02 OrthoFinder output from all 47 species
Zm00001e037542_P001 Zm00001e037542 Pentatricopeptide repeat-containing protein At4g16470... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 440 468
No external refs found!