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  5. Smo85784

Smo85784 (TRP2, TSB1, ATTSB1, TRPB)


Aliases : TRP2, TSB1, ATTSB1, TRPB

Description : Amino acid metabolism.biosynthesis.shikimate family.tryptophan.tryptophan synthase complex.beta subunit


Gene families : OG0002978 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002978_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo85784

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00062p00037290 TSB2,... Amino acid metabolism.biosynthesis.shikimate... 0.02 OrthoFinder output from all 47 species
Adi_g080919 TSB2 EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g26711 TRP2, TSB1, ATTSB1, TRPB EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Mp1g27250.1 TSB2 subunit beta of tryptophan synthase complex 0.02 OrthoFinder output from all 47 species
Msp_g09554 TRP2, TSB1, ATTSB1, TRPB EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0016.g006798 TRP2, TSB1, ATTSB1, TRPB EC_4.2 carbon-oxygen lyase & original description: CDS=1-1467 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004478 methionine adenosyltransferase activity IEP HCCA
MF GO:0004576 oligosaccharyl transferase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004827 proline-tRNA ligase activity IEP HCCA
MF GO:0005048 signal sequence binding IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0018279 protein N-linked glycosylation via asparagine IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
MF GO:0033218 amide binding IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0045454 cell redox homeostasis IEP HCCA
MF GO:0046923 ER retention sequence binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR001926 TrpB-like_PALP 67 397
No external refs found!