Smo84611

Description : RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.WOX transcription factor

Gene families : OG0001388 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001388_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Smo84611
Cluster	HCCA: Cluster_89

Target	Alias	Description	ECC score	Gene Family Method
Aev_g29846	ATWOX13, WOX13, HB-4	WOX-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g26347	ATWOX13, WOX13, HB-4	WOX-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g42081	ATWOX13, WOX13, HB-4	WOX-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0005634	nucleus	IEP	HCCA
BP	GO:0009719	response to endogenous stimulus	IEP	HCCA
BP	GO:0009725	response to hormone	IEP	HCCA
BP	GO:0009733	response to auxin	IEP	HCCA
BP	GO:0010033	response to organic substance	IEP	HCCA
BP	GO:0042221	response to chemical	IEP	HCCA
BP	GO:0050896	response to stimulus	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001356	Homeobox_dom	27	87

External Links

No external refs found!