Aliases : ATSRL1
Description : Pre-mRNA splicing factor SR-like 1 OS=Arabidopsis thaliana
Gene families : OG0003543 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003543_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Smo83934 | |
Cluster | HCCA: Cluster_64 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00170p00050330 | evm_27.TU.AmTr_v1... | Pre-mRNA splicing factor SR-like 1 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
Aob_g05835 | ATSRL1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g38592 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Solyc04g014560.4.1 | ATSRL1, Solyc04g014560 | Pre-mRNA splicing factor SR-like 1 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e031175_P003 | ATSRL1, Zm00001e031175 | Pre-mRNA splicing factor SR-like 1 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
MF | GO:0043565 | sequence-specific DNA binding | IEP | HCCA |
BP | GO:0050789 | regulation of biological process | IEP | HCCA |
BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0065007 | biological regulation | IEP | HCCA |
BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR005037 | PRP38 | 9 | 166 |
No external refs found! |