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  5. Smo82024

Smo82024 (CRR22)


Aliases : CRR22

Description : Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo82024
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00099p00097640 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g39530... 0.03 OrthoFinder output from all 47 species
AT1G77010 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G05240 MEF19 mitochondrial editing factor 19 0.04 OrthoFinder output from all 47 species
AT4G30700 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g018291 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g23669 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06727 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g06883 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30850 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g32467 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g05074 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05337 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04618 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g38090 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0136.g050953 No alias not classified & original description: CDS=1-2220 0.05 OrthoFinder output from all 47 species
Cba_g01506 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20635 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20741 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g59978 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G071400.1 Ceric.02G071400 not classified & original description: pacid=50584970... 0.05 OrthoFinder output from all 47 species
Ceric.10G062000.1 Ceric.10G062000 ssDNA-binding protein *(OSB) & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g14692 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g35673 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g39198 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g40922 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g06775 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08533 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g26743 No alias component *(MED19) of head module of MEDIATOR... 0.05 OrthoFinder output from all 47 species
Dcu_g26818 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g36056 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g38525 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g45933 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g12271 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13325 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26396 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26919 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_08118 CRR22 Pentatricopeptide repeat-containing protein At5g16860... 0.03 OrthoFinder output from all 47 species
Gb_10709 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
Gb_10922 VAC1, ECB2, ATECB2 Pentatricopeptide repeat-containing protein At3g09040,... 0.03 OrthoFinder output from all 47 species
Gb_20837 OTP84 Pentatricopeptide repeat-containing protein At2g22070... 0.04 OrthoFinder output from all 47 species
Gb_20910 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Gb_25581 OTP84 Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
Gb_25737 MEF1 RNA editing factor (MEF1) 0.03 OrthoFinder output from all 47 species
Gb_26010 No alias RNA editing factor (OTP82) 0.04 OrthoFinder output from all 47 species
Gb_27521 OTP84 Pentatricopeptide repeat-containing protein At2g22070... 0.04 OrthoFinder output from all 47 species
Gb_28664 REME1 Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
Gb_31457 EMB2261 RNA editing factor (BLX) 0.03 OrthoFinder output from all 47 species
LOC_Os01g51790.1 LOC_Os01g51790 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
LOC_Os01g68490.1 MEF21, LOC_Os01g68490 Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
LOC_Os05g24890.1 LOC_Os05g24890 Pentatricopeptide repeat-containing protein At2g34400... 0.03 OrthoFinder output from all 47 species
LOC_Os08g38610.1 LOC_Os08g38610 Pentatricopeptide repeat-containing protein At1g26900,... 0.03 OrthoFinder output from all 47 species
LOC_Os10g30760.1 LOC_Os10g30760 Pentatricopeptide repeat-containing protein At3g24000,... 0.03 OrthoFinder output from all 47 species
Len_g26584 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07796 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g11799 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g15612 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g17407 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g20192 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g21989 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g24060 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g38296 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g14266 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g65182 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g23575 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g05896 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07527 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g57859 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g19039 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g51436 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo105776 CRR2 Pentatricopeptide repeat-containing protein At3g46790,... 0.06 OrthoFinder output from all 47 species
Smo124407 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.04 OrthoFinder output from all 47 species
Smo70138 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.05 OrthoFinder output from all 47 species
Spa_g06005 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g10389 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14551 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g23985 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g24048 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g24976 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26699 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g30545 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g31286 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g32768 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05462 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g08462 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e032679_P001 Zm00001e032679 RNA editing factor (OTP80) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032867 DYW_dom 580 703
No external refs found!