1. Home
  2. Tools
  3. Expression Heatmap
  4. Results

Heatmap: Cluster_63 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

 Transpose table  Download table
Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
-1.22 -1.42 -0.68 -0.11 0.4 0.39 0.76 0.58 0.69 0.75 0.56 -0.54 -1.13 -0.45 0.27 -1.02 -0.01 -0.65 -1.9 0.85 -1.35 1.78 -0.57 -1.39 -1.16 -1.15 0.25 0.21 -0.52 -0.58 0.17 0.21
-0.02 0.09 0.27 0.21 0.23 0.49 0.32 0.07 0.35 0.29 0.2 -0.11 -0.02 -0.39 0.79 -0.44 -0.33 -0.36 -1.52 -0.86 -0.06 0.91 0.65 0.71 -0.59 -1.13 -0.89 -0.96 -0.63 -0.4 -0.23 -0.03
Smo107700 (CRR22)
 0.3 0.08 0.21 -0.02 0.56 0.42 -0.15 0.12 0.23 0.32 0.18 0.13 0.06 0.23 1.12 0.25 -0.77 -0.97 0.06 -2.12 1.19 -1.2 -0.37 -0.35 -1.12 -0.05 -0.21 -0.09 -0.24 -0.05 -1.35 -1.08
0.09 0.17 0.17 0.19 0.36 0.3 0.09 0.27 0.41 0.12 0.11 -0.01 0.06 0.11 0.28 0.42 -0.19 -0.52 0.02 -2.52 -0.28 0.53 -0.06 0.17 -0.26 -0.16 0.16 0.11 -0.38 -0.4 -0.93 -1.01
Smo113369 (SAE1B)
 -0.15 -0.27 -0.12 0.15 0.28 0.17 0.35 0.49 0.36 0.45 0.29 0.17 0.35 -0.14 0.35 0.13 -0.62 -0.88 0.09 -1.25 -0.19 0.61 -0.07 0.16 0.08 0.35 -0.32 -0.37 -0.32 -0.36 -0.93 -0.96
0.53 0.08 0.24 0.33 0.04 0.52 0.56 0.63 0.89 0.73 0.62 0.46 -1.15 -0.16 0.04 -0.94 -0.98 -0.42 -1.11 -0.95 0.01 0.78 -0.97 -1.13 0.32 0.28 0.12 -0.82 -1.04 -1.16 -0.66 -0.58
Smo143968 (LIP1)
 0.15 -0.13 -0.12 0.04 0.19 -0.18 -0.18 0.22 0.38 0.35 0.61 0.42 0.03 -0.19 -0.64 0.26 -1.12 -1.13 -0.43 0.08 -0.16 1.06 -0.94 -0.88 -0.82 0.62 0.16 0.07 -0.68 -0.65 -0.06 0.61
-0.13 0.11 0.0 0.2 -0.08 -0.08 0.08 0.05 0.15 0.13 0.03 -0.08 0.69 0.68 0.62 0.76 -0.43 -0.6 -0.62 -0.11 -0.85 1.31 -0.4 -0.48 -1.23 -0.03 -0.61 -0.57 -0.78 -0.67 -0.28 -0.04
-0.26 -0.18 -0.11 -0.08 -0.01 0.11 0.51 0.36 0.22 0.42 0.29 0.01 0.31 0.14 0.87 0.72 -0.38 -0.81 0.21 -1.22 0.15 0.45 0.01 0.16 -1.12 -0.49 -0.53 -0.4 -0.44 -0.43 -0.22 -0.76
-0.2 -0.27 -0.08 -0.23 -0.02 0.14 0.06 0.32 0.4 0.5 0.46 0.43 -0.23 -0.54 0.02 -0.36 -0.52 -0.6 -0.21 0.16 -1.71 1.52 -0.41 -0.13 -0.37 0.22 -0.32 -0.67 -0.3 -0.31 -0.07 0.27
Smo403713 (MGP2)
 -0.05 -0.06 -0.04 0.15 0.17 0.15 0.18 0.27 0.35 0.3 0.29 0.07 0.59 0.23 0.28 0.68 -0.82 -1.63 -0.34 -0.26 -0.09 0.13 -0.15 0.11 0.2 0.39 -0.09 0.02 -0.83 -0.49 -0.99 -1.17
-0.43 -0.04 0.63 0.73 0.53 0.26 0.76 0.49 0.76 0.26 0.24 -0.18 -0.4 -1.1 -2.26 -0.82 0.34 -0.28 0.89 -9.07 - 0.64 0.75 0.95 -7.21 -0.67 -0.91 -0.68 -0.08 0.05 -0.15 -0.77
0.02 0.09 0.21 0.09 0.09 0.11 0.41 0.22 0.33 0.26 0.21 0.07 -0.1 0.05 0.3 -0.03 -0.22 -0.36 -0.09 -0.11 -0.21 0.52 -0.52 -0.28 -1.57 -0.13 -0.05 -0.37 -0.29 -0.09 0.11 0.08
Smo408692 (RVE2)
 -0.72 -0.34 0.34 0.45 0.09 0.48 0.4 0.52 0.72 0.19 0.16 -0.3 -0.41 -0.39 0.18 -0.23 0.3 -0.28 -0.22 -4.25 -3.45 0.75 1.07 0.91 -1.72 0.19 -0.13 -0.54 -0.21 -0.32 -0.7 -0.99
-0.45 -0.27 -0.14 -0.09 -0.1 -0.09 0.15 0.15 0.41 0.5 0.47 0.17 0.66 0.34 0.75 0.75 -0.47 -0.97 -0.2 -0.55 -1.16 0.38 0.12 0.31 0.31 0.02 -0.98 -0.66 -0.34 -0.03 -0.95 -1.0
0.06 0.01 -0.01 -0.06 0.06 -0.02 0.09 0.14 0.17 0.3 0.25 0.16 0.09 -0.27 -0.03 0.38 -0.6 -0.72 0.1 -0.03 0.01 0.64 -0.32 -0.23 -0.78 0.29 -0.0 -0.07 -0.35 -0.17 0.0 0.01
-0.12 0.18 0.46 0.6 0.58 0.4 0.48 -0.03 -0.01 0.03 0.03 -0.12 -1.03 -0.86 1.03 -0.59 -0.13 -0.47 -0.35 0.37 -1.49 1.09 -1.32 -1.83 -0.45 0.15 0.69 0.94 -0.74 -0.52 -1.65 -1.75
Smo411235 (STN8)
 0.34 0.37 0.08 0.57 0.37 0.69 0.61 0.28 0.32 0.41 0.45 0.32 -1.17 -1.01 0.48 -0.96 -1.13 -2.43 -1.16 -3.14 -1.26 1.7 -1.27 -1.52 0.43 -0.01 0.75 0.9 -1.39 -1.35 -1.15 -1.11
Smo412427 (AAO3)
 0.23 0.36 0.27 0.18 -0.02 0.41 0.29 0.01 0.27 0.02 -1.21 -0.22 0.75 0.91 1.68 -0.16 -0.64 -0.69 0.18 -5.48 -1.5 1.56 -1.42 -2.37 -0.42 -0.37 0.14 0.16 -0.69 -0.7 -3.14 -3.25
0.51 0.61 0.55 0.54 0.41 0.48 0.06 -0.19 0.24 0.17 0.39 0.27 -1.05 0.58 1.37 0.1 0.32 -0.31 -1.04 -1.91 -2.17 1.16 -0.94 -1.43 -3.18 -0.24 -1.07 -0.58 -0.37 -0.18 -0.79 -0.9
-0.22 -0.84 -1.13 -0.77 0.11 0.08 0.59 0.96 -0.26 -0.03 -0.32 -0.35 0.22 0.61 0.6 0.01 -1.11 -0.9 -0.2 - -0.68 1.36 -0.61 -0.68 - 0.95 1.1 1.39 -0.69 -0.63 -0.79 -1.21
0.04 0.66 0.76 0.75 0.53 0.59 0.56 0.12 0.34 -0.01 0.18 -0.04 -0.25 0.57 1.28 -0.81 0.44 0.09 -1.6 0.16 -2.93 0.89 -0.82 -0.36 -3.49 -2.19 -1.37 -0.91 -0.37 -0.14 -1.27 -1.7
Smo416861 (RPL16)
 -0.24 -0.12 -0.17 0.04 0.27 0.34 0.57 0.16 0.47 0.47 0.29 0.1 -0.57 -0.48 0.4 -0.53 -0.03 -0.29 -0.78 0.27 -0.3 1.14 -0.47 -0.56 0.1 -0.8 -0.06 -0.01 -0.27 -0.16 -0.46 -0.47
-0.58 -0.3 0.36 0.55 0.51 0.26 1.06 1.06 1.01 1.17 0.87 0.19 -0.32 0.23 -0.11 -0.73 -1.97 -2.47 -2.06 -0.57 -0.23 1.38 -1.24 -0.97 -2.45 0.62 -0.83 -1.01 -1.43 -1.28 -0.95 -1.27
0.43 0.01 0.08 0.37 0.25 0.3 -0.07 0.1 0.11 0.29 0.35 0.33 -0.53 0.18 0.34 -0.28 -0.7 -3.08 -0.42 -0.07 -0.76 1.49 -0.48 -0.24 0.06 -0.06 -0.37 -0.15 -1.0 -0.9 -0.1 0.1
-0.31 -0.03 0.01 0.25 0.45 0.21 0.44 0.58 0.56 -0.32 0.21 0.02 0.41 -0.26 1.25 -0.64 -1.59 -0.91 -1.03 -5.36 -1.04 1.44 -2.02 -1.1 -0.31 -0.13 0.98 1.46 -0.98 -1.42 -2.12 -2.24
-0.03 0.42 0.52 0.53 0.27 0.18 0.41 0.12 0.4 0.64 0.62 0.36 -0.02 0.63 0.67 -0.23 -0.49 -2.5 -1.1 -0.62 -3.15 0.34 -0.59 -0.27 -0.43 0.37 -0.02 0.51 -1.37 -1.05 -0.77 -0.77
0.41 0.01 0.31 -0.04 0.05 0.17 0.3 0.01 0.32 0.72 0.6 0.42 -0.08 0.49 0.71 0.86 0.13 -3.11 -0.45 -5.39 -3.11 0.51 0.1 0.34 -3.39 -0.05 0.17 -0.31 -0.09 -0.09 -1.58 -1.15
0.26 0.02 0.13 0.06 0.45 0.43 0.57 0.04 0.47 0.23 0.08 0.21 0.09 -0.48 -0.1 -0.35 -0.97 -0.38 -0.65 -0.92 -0.87 1.08 0.05 0.67 -1.07 -0.41 0.2 0.47 -0.79 -0.43 -0.77 -0.43
Smo432595 (RPL16)
 -0.24 -0.12 -0.17 0.04 0.27 0.34 0.57 0.16 0.47 0.47 0.29 0.1 -0.57 -0.48 0.4 -0.53 -0.03 -0.29 -0.78 0.27 -0.3 1.14 -0.47 -0.56 0.1 -0.8 -0.06 -0.01 -0.27 -0.16 -0.46 -0.47
0.03 0.28 0.37 0.26 0.2 0.14 0.25 0.3 0.52 0.58 0.42 0.63 -0.08 0.08 -0.12 -0.26 -0.97 -2.46 -0.09 -1.04 -0.91 0.49 -0.43 -0.36 0.53 0.46 -0.27 -0.3 -0.74 -0.74 -0.31 -0.04
-0.06 0.15 0.05 0.19 0.03 0.32 0.18 0.14 0.11 0.24 0.08 0.2 0.03 0.34 0.35 0.18 -0.38 -0.55 0.08 -0.12 -0.55 0.65 -0.18 -0.06 -0.02 -0.57 -0.57 -0.4 -0.24 -0.22 -0.24 -0.12
0.17 0.08 0.19 0.12 0.53 0.23 -0.03 0.4 0.08 0.13 -0.07 -0.16 0.21 0.59 0.96 0.43 -0.55 -1.09 -0.38 -2.36 -0.61 1.2 -0.91 -0.98 -2.1 0.17 0.1 0.06 -0.3 -0.34 -0.42 -0.35
0.26 0.12 0.43 0.18 0.02 0.31 0.13 0.14 0.16 0.0 -0.06 -0.21 -0.18 -0.52 0.06 -0.17 -0.51 - -0.01 -2.93 -1.45 1.45 -0.24 -0.15 0.69 0.0 0.46 0.35 -0.28 -0.43 -0.22 -0.07
-0.37 0.05 0.55 0.52 0.37 0.63 0.19 0.21 0.13 -0.03 0.05 -0.14 -0.32 0.03 0.98 -0.36 -0.47 -2.31 -0.64 -0.12 -0.01 1.02 -0.3 -0.19 0.39 -0.61 0.1 0.38 -0.93 -0.67 -1.14 -1.25
0.46 0.2 0.13 0.24 0.25 0.21 0.31 0.18 0.48 0.22 0.44 0.2 0.26 -0.18 0.48 0.29 -0.08 -0.76 0.26 -1.21 -0.66 1.07 -0.23 -0.11 -1.51 -0.57 -1.24 -1.18 -0.34 -0.07 -0.57 -0.45
0.47 0.41 0.23 0.29 0.4 0.45 0.04 0.17 0.23 0.34 0.13 0.35 0.02 1.05 0.53 -0.07 -0.02 -0.69 -0.84 -0.61 -0.98 0.58 -0.51 -0.18 -0.57 -0.95 -0.25 -0.29 -0.54 -0.28 -0.93 -1.11
-0.78 -0.31 0.31 0.21 0.33 0.89 0.51 0.24 -0.14 -0.06 -0.49 -0.52 -0.07 -0.38 0.62 0.33 0.09 -0.58 -0.03 -1.07 -0.28 0.35 -0.21 -0.06 -0.11 -0.23 0.48 0.45 -0.72 -0.42 -0.36 -0.11
-0.06 0.09 0.08 0.26 0.18 0.36 0.44 0.22 0.12 0.21 -0.05 0.02 -0.0 -0.08 0.65 0.27 -0.13 -0.21 0.17 0.06 -2.35 0.27 0.08 0.18 0.15 -1.43 -0.57 -0.8 -0.32 -0.27 -0.15 0.04
0.08 0.23 0.35 0.2 -0.09 0.2 0.21 0.27 0.22 0.2 0.27 -0.07 0.26 0.11 -0.11 0.58 -0.09 -0.04 0.61 -1.59 -0.67 0.5 0.27 0.29 -0.91 -0.68 -0.86 -0.74 -0.15 -0.08 -0.67 -0.49
0.08 0.02 -0.05 0.39 0.17 0.53 0.06 0.29 0.28 0.23 0.13 0.21 0.17 0.19 0.38 0.3 -0.87 -1.11 -0.26 -0.24 -0.64 0.33 -0.15 -0.12 0.27 0.38 0.03 0.17 -0.6 -0.65 -1.02 -1.01
Smo77149 (TET8)
 0.11 0.01 -0.07 0.25 0.36 0.29 0.0 0.14 0.36 0.35 0.42 0.03 -0.02 0.15 0.73 0.17 -0.37 -0.41 0.01 -2.05 0.34 0.24 -0.26 -0.15 -0.23 -0.53 -0.24 -0.29 -0.3 -0.14 -0.5 -0.36
Smo82024 (CRR22)
 -0.66 -0.73 -0.67 -0.27 0.55 0.78 0.74 0.27 -0.01 -0.03 0.04 -0.55 0.09 0.27 0.94 0.54 -0.63 -0.52 0.01 -0.77 0.54 0.87 -0.48 -0.81 -0.59 0.09 0.36 0.25 -0.62 -0.27 -1.24 -1.78
Smo96619 (FUT13)
 0.16 0.26 0.36 0.25 0.29 0.37 0.12 -0.0 -0.1 -0.18 -0.16 -0.43 0.12 0.1 0.18 0.45 -0.08 -0.26 -0.06 -0.98 0.54 -0.13 0.2 0.14 0.52 -0.63 -0.05 -0.14 -0.29 -0.16 -1.1 -0.97
-0.14 0.17 0.3 0.2 0.1 0.2 0.19 0.26 0.35 0.32 0.34 0.04 -0.13 -0.26 -0.31 0.38 -0.06 -0.78 0.15 -0.52 -1.13 0.33 0.39 0.39 -0.84 0.01 -0.4 -0.23 0.08 0.22 -0.79 -0.54
-0.04 -0.2 0.59 0.54 1.08 0.71 0.37 0.23 0.03 0.07 -0.16 -0.64 -0.14 -0.78 -0.3 0.09 -0.74 -0.83 -0.1 -0.96 0.18 1.25 -0.5 -0.5 -0.18 0.24 0.27 0.52 -1.05 -1.06 -1.48 -1.14

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.