Smo80672

Description : RNA biosynthesis.transcriptional activation.C3H zinc finger transcription factor

Gene families : OG0004039 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004039_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Smo80672
Cluster	HCCA: Cluster_60

Target	Alias	Description	ECC score	Gene Family Method
AT2G20280	No alias	Zinc finger C-x8-C-x5-C-x3-H type family protein	0.06	OrthoFinder output from all 47 species
Aev_g02276	No alias	regulatory protein of RNA homeostasis & original...	0.02	OrthoFinder output from all 47 species
Ceric.01G076400.1	Ceric.01G076400	regulatory protein of RNA homeostasis & original...	0.03	OrthoFinder output from all 47 species
Dcu_g01432	No alias	regulatory protein of RNA homeostasis & original...	0.02	OrthoFinder output from all 47 species
Ore_g03565	No alias	regulatory protein of RNA homeostasis & original...	0.04	OrthoFinder output from all 47 species
Solyc09g007230.3.1	Solyc09g007230	C3H zinc finger transcription factor	0.03	OrthoFinder output from all 47 species
Zm00001e019376_P001	Zm00001e019376	C3H zinc finger transcription factor	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
CC	GO:0005634	nucleus	IEP	HCCA
CC	GO:0034457	Mpp10 complex	IEP	HCCA
CC	GO:0043227	membrane-bounded organelle	IEP	HCCA
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR032378	ZC3H15/TMA46_C	226	306

External Links

No external refs found!