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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Aerial tissue - Light - ZT1 | Aerial tissue - Light - ZT3 | Aerial tissue - Light - ZT5 | Aerial tissue - Light - ZT7 | Aerial tissue - Light - ZT9 | Aerial tissue - Light - ZT11 | Aerial tissue - Dark - ZT1 | Aerial tissue - Dark - ZT3 | Aerial tissue - Dark - ZT5 | Aerial tissue - Dark - ZT7 | Aerial tissue - Dark - ZT9 | Aerial tissue - Dark - ZT11 | Roots | Root elongation and differentiation zone | Root meristematic zone | Aerial roots and rhizophores | Shoot tips | Microphyll | Strobili | Shoot apical meristem - AC | Shoot apical meristem - Core | Shoot apical meristem - P1 | Stem - Top | Stem - Bottom | Whole plant | Aerial tissue - Stress - Dark | Aerial tissue - Stress - High light | Aerial tissue - Stress - Cont | Aerial tissue - Stress - 37C 1h | Aerial tissue - Stress - 37C 3h | Aerial tissue - Stress - 4C 1h | Aerial tissue - Stress - 4C 3h |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| -0.3 | -0.21 | -0.29 | -0.08 | 0.17 | 0.04 | 0.13 | 0.38 | 0.16 | 0.08 | 0.02 | -0.18 | -0.54 | -0.87 | 0.53 | -0.25 | -0.54 | -1.03 | 0.08 | 0.24 | -1.59 | -1.65 | -0.43 | -0.39 | -0.03 | 0.98 | 1.33 | 1.29 | -0.39 | -0.31 | -0.51 | -0.58 | |
| -0.36 | -0.26 | -0.31 | -0.24 | -0.06 | -0.13 | -0.22 | -0.13 | -0.3 | -0.29 | -0.46 | -0.4 | -1.18 | -0.96 | -0.41 | -0.61 | -0.65 | -0.56 | -0.23 | 0.99 | -2.02 | 0.17 | -0.49 | -0.39 | 0.51 | 0.96 | 1.76 | 1.43 | -0.29 | -0.31 | -0.37 | -0.37 | |
| -0.59 | -0.71 | -0.2 | -0.66 | -0.57 | -0.09 | -0.35 | -0.26 | -0.13 | -0.53 | -0.7 | -0.94 | 0.49 | 0.05 | 0.85 | 0.71 | -0.47 | 0.26 | 0.17 | 0.89 | 0.3 | 0.05 | 0.05 | 0.32 | 0.09 | -0.1 | 0.56 | 0.27 | -0.52 | -0.46 | -0.27 | -0.02 | |
| -2.61 | -3.22 | -0.91 | -0.87 | - | - | - | - | -2.46 | - | -1.33 | - | -0.45 | 0.5 | 0.39 | -1.57 | -1.41 | -1.76 | -0.73 | 2.07 | 1.4 | 1.5 | -0.98 | -0.89 | 0.75 | 2.09 | 1.37 | 2.16 | -2.88 | -0.82 | -1.68 | -1.98 | |
Smo132785 (FCA) | -0.2 | -0.3 | -0.43 | -0.31 | -0.19 | -0.54 | -0.26 | -0.17 | 0.09 | -0.11 | -0.12 | -0.17 | 0.19 | -0.08 | 0.05 | 0.24 | -0.19 | -0.56 | 0.2 | 0.24 | -2.78 | -0.66 | -0.03 | -0.23 | -1.22 | 1.28 | 0.9 | 1.07 | -0.12 | 0.01 | 0.05 | 0.16 |
| -0.68 | -0.16 | -0.13 | 0.08 | 0.27 | 0.47 | 0.38 | 0.2 | -0.08 | -0.26 | -0.43 | -0.57 | -0.39 | -0.41 | 0.86 | -0.19 | -0.69 | -1.03 | -0.02 | 0.31 | -1.19 | -0.91 | -0.38 | -0.33 | 0.85 | 0.66 | 1.2 | 1.27 | -0.64 | -0.6 | -1.33 | -1.3 | |
Smo166865 (HMG) | -0.02 | -0.19 | -0.14 | -0.06 | -0.01 | -0.1 | -0.01 | 0.21 | 0.04 | 0.1 | 0.03 | -0.04 | -0.15 | -0.31 | 0.69 | -0.1 | -0.84 | -1.13 | 0.15 | -0.19 | -0.85 | -0.72 | -0.66 | -0.44 | -0.48 | 1.39 | 1.12 | 0.98 | -0.53 | -0.43 | -0.62 | -0.5 |
| -0.01 | -0.13 | -0.75 | -1.1 | -1.54 | -1.42 | -1.69 | -1.66 | -1.37 | -1.3 | -1.21 | -0.51 | -0.1 | 0.85 | -0.72 | 0.75 | 0.09 | 1.17 | 0.42 | 1.28 | 1.86 | 1.05 | -0.57 | -0.54 | 0.84 | -0.55 | -1.39 | -2.02 | -0.03 | -0.07 | -0.45 | -0.2 | |
| -0.09 | -0.34 | -0.33 | -0.38 | -0.24 | -0.28 | -0.11 | -0.05 | -0.08 | -0.11 | -0.16 | -0.45 | -0.7 | 0.21 | 0.35 | -0.2 | -0.62 | -0.51 | -0.21 | 0.38 | 0.0 | 1.05 | -0.66 | -0.71 | -1.18 | 1.37 | 1.23 | 0.86 | -0.58 | -0.66 | -0.58 | -0.44 | |
| -0.04 | -0.15 | -0.21 | -0.03 | -0.04 | 0.16 | 0.1 | -0.12 | -0.1 | -0.09 | -0.25 | -0.3 | -0.13 | -0.35 | 0.07 | 0.15 | -0.54 | -0.45 | 0.13 | 0.35 | -1.17 | -1.0 | -0.46 | -0.38 | 0.48 | 1.1 | 1.03 | 1.13 | -0.31 | -0.32 | -0.69 | -0.77 | |
| -0.21 | -0.7 | -0.89 | -0.61 | -0.48 | -0.36 | -0.42 | 0.1 | -0.26 | -0.12 | -0.34 | -0.28 | -0.24 | -0.53 | 0.04 | -0.22 | -0.6 | - | -0.08 | 1.44 | -0.1 | 0.46 | -0.35 | -0.4 | 0.31 | 1.18 | 0.84 | 0.53 | -0.57 | -0.75 | 0.36 | 0.81 | |
| -0.07 | -0.07 | -0.13 | 0.03 | 0.33 | 0.17 | 0.0 | 0.23 | -0.04 | -0.09 | 0.02 | -0.36 | -0.37 | -0.64 | 0.54 | -0.35 | -0.87 | -1.06 | -0.2 | 0.31 | -7.85 | -1.22 | -0.67 | -0.68 | -3.07 | 1.4 | 1.71 | 1.77 | -0.79 | -0.75 | -1.39 | -1.24 | |
| -1.09 | -1.12 | -0.8 | -1.34 | -1.36 | -0.72 | -0.5 | -0.12 | -0.33 | -0.6 | -0.46 | -1.22 | 0.62 | 0.04 | -0.87 | 0.24 | -0.66 | 0.33 | -0.39 | 1.94 | 1.07 | 0.34 | 0.09 | 0.4 | -1.42 | 0.24 | -0.36 | -0.1 | -0.37 | -0.5 | 0.64 | 1.03 | |
Smo402470 (emb1745) | -0.03 | 0.08 | 0.14 | 0.25 | 0.16 | 0.16 | -0.06 | 0.04 | 0.1 | 0.03 | 0.08 | -0.12 | 0.2 | -0.24 | 0.59 | 0.36 | -0.32 | -1.1 | 0.12 | -0.16 | -3.34 | -1.04 | -0.18 | -0.09 | -1.54 | 0.83 | 0.87 | 0.99 | -0.3 | -0.21 | -0.53 | -0.6 |
| -0.32 | -0.23 | -0.01 | 0.01 | 0.07 | 0.5 | 0.5 | 0.51 | 0.02 | -0.13 | -0.22 | -0.3 | -1.35 | -1.27 | 0.22 | -1.3 | -0.39 | -0.77 | -0.69 | 0.45 | -1.55 | -0.27 | -0.77 | -0.83 | 0.74 | 0.23 | 1.63 | 1.64 | -0.74 | -0.64 | -1.08 | -0.67 | |
| 0.25 | 0.37 | -0.0 | 0.3 | 0.3 | 0.39 | 0.26 | 0.32 | 0.35 | 0.31 | 0.18 | 0.21 | -0.13 | -0.53 | -0.08 | -0.17 | -0.91 | -0.8 | -0.58 | 0.55 | -1.36 | 0.35 | -1.01 | -0.92 | -0.65 | 0.4 | 1.04 | 0.73 | -0.82 | -0.78 | -0.76 | -0.49 | |
| 0.13 | -0.58 | -0.59 | -0.32 | 0.2 | 0.18 | 1.29 | -0.97 | -1.05 | 0.23 | 0.21 | -1.15 | -2.46 | 0.43 | 0.23 | -4.2 | -1.92 | -1.58 | -1.47 | 0.7 | -0.72 | -2.81 | -1.78 | -4.28 | -0.45 | 2.18 | 2.34 | 1.35 | -1.61 | -2.0 | -2.02 | -2.72 | |
| -0.79 | -0.83 | -1.02 | -1.07 | -1.45 | -0.82 | -0.98 | -0.87 | -0.86 | -0.93 | -1.05 | -0.87 | -0.42 | -0.66 | 0.03 | -0.47 | -0.19 | 0.01 | 0.28 | 1.84 | -0.59 | 0.35 | -0.17 | -0.41 | -0.73 | 1.42 | 1.31 | 1.27 | -0.32 | -0.15 | 0.29 | 0.39 | |
| -2.15 | - | - | -1.8 | -0.12 | 0.5 | -1.0 | -0.44 | -1.41 | -3.44 | 0.07 | - | -2.01 | -2.27 | -0.44 | 0.25 | -3.16 | -1.31 | 1.3 | 1.26 | - | -0.63 | 0.07 | 0.74 | -1.12 | 1.33 | 2.76 | 1.64 | -1.22 | 0.31 | -3.19 | -0.66 | |
| -3.75 | -3.46 | -4.12 | -2.06 | -1.93 | -1.92 | -2.23 | -1.98 | -2.89 | -2.02 | -4.9 | -3.01 | -1.53 | 0.01 | -4.73 | -1.39 | -2.3 | -0.82 | -0.6 | 2.03 | -1.9 | -3.85 | -2.39 | -2.29 | -1.79 | 2.77 | 2.87 | 2.29 | 0.03 | -1.36 | -0.37 | -1.09 | |
| -0.4 | -0.4 | -0.62 | -0.09 | 0.11 | 0.37 | 0.3 | 0.49 | 0.14 | 0.2 | 0.16 | -0.09 | 0.06 | -0.61 | 0.02 | 0.19 | -0.81 | -1.69 | -0.42 | 0.59 | -0.92 | -4.72 | -0.76 | -0.28 | 0.12 | 1.16 | 1.36 | 1.16 | -0.56 | -0.33 | -1.14 | -0.82 | |
| -0.19 | 0.17 | 0.26 | 0.25 | 0.31 | 0.28 | -0.01 | 0.07 | -0.06 | -0.23 | -0.2 | -0.59 | -0.0 | -0.34 | 0.66 | -0.0 | -0.35 | -0.53 | -0.06 | -0.58 | -1.73 | -0.68 | -0.26 | -0.59 | -2.05 | 0.78 | 1.39 | 1.7 | -0.67 | -0.44 | -1.6 | -1.48 | |
Smo418546 (SWC2) | -0.48 | -0.47 | -0.34 | -0.26 | -0.22 | -0.09 | -0.11 | 0.08 | -0.04 | -0.07 | -0.01 | -0.2 | -0.14 | -0.22 | -0.33 | 0.16 | -0.41 | -0.93 | 0.19 | 0.24 | 0.24 | 0.39 | -0.31 | -0.2 | -0.5 | 1.03 | 0.94 | 1.08 | -0.15 | -0.06 | -0.66 | -0.63 |
| 0.08 | 0.36 | 0.13 | 0.58 | 0.75 | 0.5 | 0.39 | 0.44 | -0.1 | -0.43 | -0.02 | 0.03 | -2.04 | -2.03 | 0.21 | -0.69 | -0.63 | -4.05 | -0.33 | 0.85 | 0.05 | -0.71 | -0.74 | -0.67 | 0.39 | 0.81 | 1.18 | 0.89 | -0.98 | -1.1 | -0.89 | -1.05 | |
Smo426553 (UPF1) | -0.32 | 0.12 | 0.18 | 0.16 | 0.24 | 0.44 | 0.64 | 0.43 | 0.54 | 0.11 | 0.3 | -0.0 | -0.86 | -1.4 | 1.02 | -1.3 | -0.72 | -0.75 | -0.51 | 0.68 | -1.06 | -0.01 | -0.78 | -0.74 | -0.65 | 0.02 | 1.15 | 0.9 | -0.92 | -0.75 | -0.88 | -0.41 |
| 0.12 | 0.19 | 0.17 | 0.16 | 0.32 | 0.35 | 0.16 | 0.24 | -0.06 | -0.04 | -0.07 | -0.19 | -0.35 | -0.11 | 0.4 | -0.25 | -0.6 | -0.68 | -0.12 | -0.33 | -2.25 | -1.11 | -0.49 | -0.37 | 0.29 | 0.74 | 1.28 | 1.23 | -0.83 | -0.76 | -0.81 | -0.93 | |
| -0.49 | -0.76 | -0.68 | -0.52 | -0.32 | -0.55 | -0.25 | -0.18 | -0.54 | -0.9 | -0.77 | -0.59 | -0.14 | 0.14 | 0.28 | 0.19 | -0.16 | -3.21 | 0.08 | 1.2 | -0.57 | -0.94 | -0.02 | 0.12 | 0.68 | 1.41 | 1.09 | 1.31 | -0.24 | -0.31 | -0.78 | -0.73 | |
Smo438145 (TRO) | -0.23 | -0.24 | -0.05 | -0.02 | 0.06 | 0.28 | 0.25 | 0.15 | -0.04 | -0.04 | -0.05 | -0.25 | -0.25 | -0.21 | 0.22 | -0.44 | -0.49 | -0.62 | -0.45 | 0.39 | -0.12 | -0.31 | -0.47 | -0.26 | 0.31 | -0.05 | 1.07 | 1.04 | -0.66 | -0.56 | 0.06 | 0.03 |
| -2.01 | -1.98 | -2.48 | -1.96 | -2.3 | -2.13 | -1.29 | -1.29 | -1.01 | -0.97 | -1.12 | -1.23 | -1.22 | -0.71 | -1.13 | 0.07 | -1.69 | -0.42 | 0.2 | 2.73 | 2.11 | -0.2 | -1.31 | -0.47 | -1.63 | -0.0 | -0.45 | -1.4 | -0.6 | -0.85 | 1.63 | 1.8 | |
Smo442703 (PLMT) | -0.16 | -0.5 | -0.67 | -0.68 | -1.18 | -0.22 | -0.47 | -0.38 | -0.1 | -0.21 | -0.75 | -0.27 | -0.93 | 1.0 | 1.08 | 0.18 | -0.76 | -0.16 | 0.23 | 1.82 | 1.68 | -0.5 | -1.25 | -0.88 | 0.04 | -2.27 | -1.58 | -1.8 | -0.19 | -0.06 | 0.5 | 0.25 |
Smo447018 (MUS81) | 0.13 | 0.08 | -0.03 | 0.15 | 0.1 | 0.46 | 0.4 | 0.2 | 0.12 | 0.12 | -0.2 | 0.0 | -0.91 | -1.26 | 0.4 | -0.77 | -0.83 | -0.75 | -0.52 | 0.34 | -2.58 | 0.6 | -0.98 | -1.04 | -0.11 | 0.77 | 1.46 | 1.45 | -0.94 | -0.83 | -1.1 | -1.01 |
Smo449148 (RAD4) | -0.73 | -0.71 | -0.77 | -0.19 | 0.36 | 0.3 | 0.2 | 0.29 | 0.12 | -0.06 | -0.34 | -0.6 | -0.27 | -0.37 | 0.99 | 0.09 | -0.58 | -0.6 | 0.21 | 0.0 | -4.05 | -0.12 | -0.43 | -0.44 | -2.1 | 1.45 | 1.36 | 0.91 | -0.45 | -0.42 | -0.36 | -0.56 |
| -0.96 | -0.74 | -0.8 | -0.15 | 0.36 | 0.26 | 0.14 | 0.11 | -0.54 | -0.36 | -0.53 | -0.98 | -0.4 | -0.87 | 1.19 | -0.49 | -1.24 | -1.41 | -0.21 | 0.88 | - | -4.68 | -0.87 | -0.79 | -3.53 | 1.41 | 2.11 | 2.21 | -1.3 | -1.12 | -1.98 | -1.61 | |
| -0.69 | -0.88 | -0.72 | -0.58 | -0.07 | -0.35 | -0.18 | 0.11 | -0.25 | -0.64 | -0.83 | -0.72 | -0.47 | 0.07 | 1.03 | -0.15 | -0.72 | -0.72 | -0.21 | -0.17 | -7.22 | -4.14 | -0.71 | -0.49 | -3.41 | 1.77 | 2.07 | 2.02 | -0.52 | -0.69 | -0.9 | -0.96 | |
Smo75793 (NRPB7) | -0.78 | -0.42 | -0.4 | 0.13 | -0.09 | 0.18 | 0.24 | 0.04 | 0.14 | -0.41 | -0.5 | -0.82 | 0.46 | 0.45 | 0.68 | 0.51 | -0.09 | -0.36 | 0.34 | 0.94 | 0.22 | 0.12 | 0.18 | 0.29 | -0.26 | -0.67 | -0.29 | -0.18 | 0.02 | 0.24 | -1.35 | -1.45 |
Smo76616 (HTB4) | -3.92 | -2.59 | -2.08 | -2.19 | -3.94 | -2.02 | -4.1 | -2.61 | -0.99 | -3.32 | -3.16 | -3.08 | 1.25 | -0.33 | 0.17 | 0.43 | 1.14 | 1.91 | 0.32 | 2.21 | 2.01 | 1.18 | -1.76 | -1.88 | 1.18 | - | - | - | -0.69 | 0.02 | -0.7 | 0.11 |
| -0.6 | -0.55 | -0.51 | -0.12 | 0.02 | 0.08 | -0.21 | -0.43 | -0.27 | -0.41 | -0.93 | -0.8 | 0.02 | 0.36 | 0.62 | 0.74 | -0.45 | -0.49 | 0.4 | 0.95 | 0.42 | 0.36 | -0.11 | 0.1 | 0.06 | 0.08 | 0.48 | 0.55 | -0.44 | -0.29 | -0.76 | -0.41 | |
| -0.43 | -0.27 | -0.43 | -0.09 | -0.09 | -0.09 | -0.14 | -0.05 | -0.04 | -0.31 | -0.21 | -0.28 | -0.28 | -0.3 | 0.27 | -0.01 | -0.48 | -0.91 | -0.11 | 0.74 | -0.63 | 0.25 | -0.31 | -0.28 | -0.87 | 1.12 | 1.23 | 1.25 | -0.36 | -0.27 | -0.62 | -0.55 | |
| -0.03 | -0.06 | -0.21 | -0.04 | -0.04 | 0.13 | 0.01 | 0.04 | -0.07 | -0.14 | -0.22 | -0.2 | -0.02 | -0.02 | 0.57 | 0.17 | -0.51 | -0.66 | 0.1 | -0.12 | -0.68 | -0.91 | -0.27 | -0.08 | -0.4 | 0.85 | 1.11 | 0.9 | -0.6 | -0.55 | -0.16 | -0.18 | |
| -0.51 | -0.31 | -0.39 | -0.06 | 0.04 | 0.12 | -0.05 | 0.08 | -0.18 | -0.38 | -0.45 | -0.57 | -0.19 | -0.59 | 0.75 | 0.08 | -0.62 | -0.9 | 0.13 | 0.0 | -2.3 | -0.66 | -0.45 | -0.36 | -0.34 | 1.52 | 1.51 | 1.42 | -0.71 | -0.65 | -0.71 | -0.68 | |
Smo89499 (TPK2) | -0.39 | -0.41 | -0.92 | -0.39 | -0.75 | -0.34 | -0.92 | -0.45 | -0.33 | -0.15 | -0.26 | -0.12 | -0.43 | 1.62 | 1.61 | 0.61 | -1.17 | -0.49 | -0.33 | 1.4 | 1.73 | -1.76 | -1.4 | -1.14 | -0.09 | -0.62 | -1.05 | -0.97 | -0.64 | -0.88 | -0.13 | -0.01 |
| -0.67 | -0.52 | -0.58 | -0.19 | 0.11 | -0.06 | -0.01 | 0.18 | -0.03 | -0.03 | -0.3 | -0.32 | -0.15 | 0.07 | 0.3 | -0.07 | -0.57 | -0.8 | -0.07 | 0.16 | -0.28 | -0.63 | -0.52 | -0.37 | 0.19 | 1.54 | 1.08 | 1.16 | -0.35 | -0.36 | -0.98 | -0.89 | |
| -0.18 | -0.07 | -0.29 | -0.32 | -0.46 | -0.26 | -0.51 | -0.47 | -0.09 | 0.11 | -0.46 | 0.06 | 0.5 | -0.69 | -1.26 | 0.54 | -0.46 | 0.19 | 0.22 | 1.16 | 0.59 | 0.17 | 0.08 | 0.04 | 0.48 | -0.23 | -0.62 | -0.7 | 0.02 | -0.12 | 0.15 | 0.42 | |
| -0.6 | -0.66 | -0.27 | -0.24 | -0.21 | -0.18 | -0.23 | -0.15 | -0.18 | -0.32 | -0.3 | -0.6 | 0.06 | -0.44 | -0.08 | 0.24 | -0.49 | -0.75 | 0.05 | 1.1 | -0.27 | 0.48 | -0.32 | -0.27 | 0.32 | 1.2 | 0.88 | 1.13 | -0.47 | -0.33 | -0.87 | -1.04 | |
| -0.57 | 0.1 | 0.64 | 0.49 | 0.38 | 0.4 | 0.72 | 0.17 | 0.44 | 0.24 | 0.03 | -0.34 | -1.32 | -1.67 | 0.46 | -0.93 | 0.14 | -0.55 | -1.11 | 0.15 | -0.39 | 0.25 | -0.89 | -1.19 | -0.93 | -0.15 | 1.29 | 1.37 | -0.57 | -0.58 | -1.23 | -1.21 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.