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Heatmap: Cluster_60 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
30.8 32.91 31.13 35.86 42.75 39.16 41.44 49.4 42.28 40.02 38.39 33.46 26.15 20.75 55.01 31.87 26.07 18.61 40.22 44.97 12.65 12.12 28.16 28.98 37.23 74.83 95.16 93.08 28.88 30.54 26.6 25.43
18.97 20.34 19.67 20.7 23.38 22.34 20.96 22.35 19.84 19.97 17.79 18.55 10.77 12.57 18.31 15.98 15.57 16.6 20.85 48.32 6.0 27.44 17.36 18.63 34.68 47.47 82.89 65.59 19.91 19.63 18.86 18.84
22.62 20.73 29.63 21.5 22.95 31.91 26.64 28.37 31.02 23.45 20.96 17.7 47.65 35.16 61.35 55.54 24.55 40.6 38.27 63.12 41.79 35.06 35.22 42.3 36.1 31.67 50.05 40.83 23.67 24.65 28.09 33.49
1.27 0.83 4.13 4.25 0.0 0.0 0.0 0.0 1.41 0.0 3.09 0.0 5.67 10.96 10.14 2.6 2.92 2.29 4.68 32.65 20.54 22.0 3.93 4.18 13.05 33.05 20.0 34.79 1.06 4.38 2.42 1.97
Smo132785 (FCA)
 31.76 29.54 27.01 29.31 31.87 25.05 30.34 32.29 38.76 33.76 33.62 32.29 41.65 34.37 37.64 43.15 32.05 24.68 41.93 43.18 5.3 23.09 35.58 31.07 15.67 88.22 67.89 76.46 33.57 36.71 37.81 40.75
31.1 44.49 45.36 52.37 59.93 69.0 64.77 56.87 46.85 41.52 36.82 33.54 37.89 37.38 89.89 43.46 30.84 24.32 48.94 61.65 21.7 26.4 38.29 39.53 89.58 78.44 114.28 119.64 31.77 32.88 19.79 20.22
Smo166865 (HMG)
 48.71 43.31 44.92 47.27 49.19 45.91 49.17 57.12 50.7 52.96 50.43 48.1 44.63 39.96 79.84 46.17 27.65 22.56 54.9 43.35 27.38 30.02 31.31 36.43 35.42 129.56 107.41 97.58 34.2 36.74 32.11 34.93
232.41 214.35 139.77 109.67 80.54 87.63 72.73 74.25 90.65 95.03 101.17 164.67 218.82 423.19 142.83 393.6 249.17 526.7 313.31 571.27 851.33 484.58 157.71 162.02 418.86 160.1 89.51 57.81 230.2 223.04 172.03 204.06
60.78 51.28 51.55 49.6 54.92 53.22 60.13 62.59 61.24 59.99 57.83 47.38 39.74 74.81 82.38 56.14 42.07 45.39 55.77 84.22 64.89 133.99 40.93 39.65 28.51 167.54 151.32 117.19 43.33 40.93 43.4 47.79
28.14 26.0 24.96 28.42 28.19 32.42 30.96 26.71 27.05 27.2 24.28 23.52 26.51 22.74 30.45 32.21 19.97 21.23 31.62 36.88 12.85 14.5 20.98 22.27 40.39 62.14 58.98 63.29 23.37 23.17 17.89 17.03
10.06 7.16 6.26 7.6 8.34 9.06 8.65 12.43 9.67 10.69 9.15 9.56 9.86 8.06 11.97 9.95 7.65 0.0 10.97 31.51 10.8 16.01 9.12 8.81 14.4 26.35 20.74 16.82 7.8 6.9 14.89 20.34
12.07 12.09 11.58 12.92 15.94 14.21 12.69 14.89 12.34 11.9 12.82 9.9 9.8 8.12 18.48 9.91 6.91 6.07 10.99 15.68 0.06 5.44 7.97 7.89 1.51 33.33 41.54 43.24 7.35 7.54 4.82 5.36
1.4 1.37 1.7 1.17 1.15 1.8 2.1 2.72 2.36 1.95 2.16 1.27 4.54 3.05 1.62 3.51 1.88 3.73 2.26 11.34 6.22 3.74 3.15 3.91 1.11 3.49 2.31 2.76 2.29 2.1 4.63 6.03
Smo402470 (emb1745)
 15.4 16.69 17.38 18.72 17.57 17.63 15.08 16.22 16.93 16.14 16.64 14.48 18.05 13.31 23.67 20.18 12.62 7.33 17.11 14.15 1.56 7.66 13.9 14.84 5.4 27.92 28.72 31.19 12.77 13.66 10.94 10.38
35.78 37.99 44.11 44.86 46.68 63.13 63.06 63.33 45.22 40.71 38.25 36.07 17.54 18.43 52.04 18.07 33.98 26.15 27.61 60.79 15.25 36.91 26.07 25.05 74.41 52.42 138.35 139.0 26.72 28.61 21.11 28.08
18.21 19.76 15.3 18.91 18.86 20.13 18.39 19.13 19.46 18.95 17.38 17.76 14.03 10.6 14.51 13.57 8.16 8.8 10.26 22.35 5.97 19.56 7.59 8.09 9.72 20.23 31.43 25.32 8.66 8.92 9.07 10.89
0.74 0.45 0.45 0.54 0.78 0.77 1.65 0.35 0.33 0.79 0.78 0.3 0.12 0.91 0.79 0.04 0.18 0.23 0.24 1.1 0.41 0.1 0.2 0.03 0.49 3.06 3.42 1.72 0.22 0.17 0.17 0.1
10.65 10.37 9.06 8.77 6.76 10.41 9.32 10.08 10.15 9.65 8.91 10.11 13.79 11.61 18.84 13.26 16.12 18.57 22.43 65.96 12.2 23.49 16.38 13.84 11.08 49.23 45.54 44.56 14.75 16.64 22.56 24.15
0.05 0.0 0.0 0.06 0.2 0.31 0.11 0.16 0.08 0.02 0.23 0.0 0.05 0.04 0.16 0.26 0.02 0.09 0.53 0.52 0.0 0.14 0.23 0.36 0.1 0.54 1.47 0.67 0.09 0.27 0.02 0.14
0.51 0.62 0.39 1.63 1.78 1.79 1.45 1.73 0.92 1.67 0.23 0.84 2.35 6.83 0.26 2.59 1.38 3.86 4.49 27.78 1.82 0.47 1.3 1.39 1.96 46.46 49.64 33.19 6.94 2.65 5.24 3.18
5.94 5.95 5.13 7.4 8.49 10.13 9.66 11.0 8.67 9.03 8.75 7.38 8.21 5.14 7.96 8.95 4.48 2.44 5.87 11.84 4.16 0.3 4.63 6.47 8.52 17.6 20.18 17.57 5.32 6.24 3.58 4.44
9.27 11.9 12.61 12.55 13.06 12.83 10.46 11.11 10.13 8.99 9.22 7.0 10.55 8.36 16.71 10.53 8.29 7.3 10.14 7.07 3.19 6.6 8.82 7.0 2.56 18.13 27.59 34.44 6.62 7.77 3.48 3.79
Smo418546 (SWC2)
 34.19 34.32 37.65 39.84 40.96 44.75 44.08 50.41 46.39 45.42 47.29 41.62 43.29 40.95 37.85 53.17 35.86 25.07 54.41 56.25 56.15 62.6 38.34 41.46 33.61 97.32 91.52 100.75 42.88 45.56 30.26 30.8
2.39 2.9 2.48 3.38 3.81 3.2 2.98 3.07 2.12 1.69 2.24 2.31 0.55 0.55 2.61 1.41 1.47 0.14 1.8 4.08 2.34 1.39 1.36 1.43 2.97 3.99 5.14 4.22 1.15 1.06 1.22 1.1
Smo426553 (UPF1)
 4.09 5.57 5.79 5.71 6.03 6.94 7.96 6.92 7.42 5.55 6.3 5.12 2.81 1.94 10.36 2.08 3.1 3.04 3.61 8.22 2.45 5.07 2.98 3.07 3.26 5.18 11.37 9.56 2.71 3.06 2.78 3.85
57.43 60.5 59.54 59.27 66.13 67.66 59.01 62.56 50.69 51.41 50.35 46.57 41.59 48.99 69.84 44.39 34.96 32.98 48.74 42.23 11.15 24.52 37.63 41.06 64.81 88.13 128.91 124.29 29.69 31.29 30.1 27.87
6.24 5.16 5.44 6.11 7.0 5.95 7.34 7.73 6.03 4.69 5.13 5.79 7.91 9.64 10.58 9.97 7.79 0.94 9.21 20.02 5.89 4.54 8.59 9.48 14.02 23.26 18.64 21.62 7.41 7.06 5.08 5.28
Smo438145 (TRO)
 27.01 26.94 30.58 31.39 33.13 38.54 37.65 35.13 30.79 30.82 30.74 26.77 26.73 27.54 36.98 23.46 22.66 20.68 23.17 41.66 29.19 25.61 22.84 26.45 39.36 30.74 66.86 65.42 20.02 21.57 33.09 32.42
11.56 11.83 8.33 12.0 9.44 10.64 19.02 19.05 23.13 23.79 21.46 19.8 20.02 28.49 21.28 49.0 14.39 34.89 53.37 308.24 200.58 40.47 18.83 33.69 15.01 46.5 34.18 17.63 30.66 25.9 144.56 162.45
Smo442703 (PLMT)
 21.43 16.88 15.04 14.97 10.55 20.59 17.29 18.42 22.36 20.72 14.17 19.87 12.51 47.72 50.59 27.0 14.09 21.35 28.0 84.48 76.41 16.86 10.08 13.02 24.59 4.94 8.01 6.88 21.01 22.92 33.85 28.41
Smo447018 (MUS81)
 27.37 26.33 24.44 27.58 26.81 34.41 32.79 28.62 27.1 27.16 21.66 24.95 13.25 10.39 32.82 14.62 13.98 14.82 17.36 31.46 4.17 37.82 12.64 12.1 23.15 42.54 68.47 68.06 13.03 14.06 11.62 12.35
Smo449148 (RAD4)
 4.66 4.73 4.54 6.76 9.9 9.53 8.88 9.45 8.37 7.39 6.11 5.1 6.4 5.98 15.32 8.2 5.16 5.1 8.96 7.73 0.47 7.1 5.74 5.68 1.8 21.05 19.89 14.51 5.64 5.79 6.01 5.22
4.29 5.0 4.8 7.57 10.71 10.03 9.26 9.02 5.76 6.52 5.79 4.25 6.35 4.6 19.15 5.95 3.56 3.16 7.26 15.41 0.0 0.33 4.59 4.86 0.73 22.21 36.12 38.64 3.39 3.86 2.13 2.75
7.83 6.85 7.68 8.43 12.03 9.88 11.13 13.62 10.6 8.09 7.07 7.64 9.1 13.27 25.68 11.36 7.64 7.65 10.9 11.16 0.08 0.71 7.72 8.98 1.18 43.0 52.93 51.25 8.78 7.79 6.76 6.49
Smo75793 (NRPB7)
 24.0 30.8 31.24 44.89 38.49 46.6 48.44 42.27 45.19 31.02 29.06 23.34 56.32 56.26 65.89 58.69 38.47 32.06 52.04 78.67 47.99 44.58 46.45 50.36 34.41 25.85 33.52 36.21 41.75 48.68 16.07 15.02
Smo76616 (HTB4)
 0.11 0.29 0.41 0.38 0.11 0.43 0.1 0.28 0.87 0.17 0.19 0.2 4.11 1.37 1.94 2.33 3.81 6.51 2.16 7.98 6.95 3.9 0.51 0.47 3.91 0.0 0.0 0.0 1.07 1.75 1.06 1.86
21.89 22.63 23.31 30.47 33.68 34.93 28.57 24.66 27.57 24.91 17.39 19.02 33.6 42.62 51.08 55.19 24.23 23.6 43.74 63.88 44.23 42.43 30.76 35.59 34.6 35.14 46.27 48.46 24.36 27.02 19.56 24.93
34.81 38.91 34.7 44.01 44.03 43.95 42.46 45.19 45.34 37.72 40.52 38.47 38.44 37.92 56.47 46.33 33.55 24.86 43.4 77.88 30.25 55.52 37.67 38.56 25.67 101.62 109.54 111.27 36.51 38.74 30.46 31.99
77.93 76.06 68.84 77.12 77.18 87.01 80.21 81.53 75.69 71.92 68.34 69.19 78.41 78.46 118.02 89.3 55.7 50.44 85.01 73.08 49.72 42.43 65.93 75.02 60.16 143.53 171.69 148.3 52.51 54.44 71.01 70.41
28.0 32.1 30.5 38.26 41.15 43.3 38.57 42.18 35.13 30.62 29.16 26.78 35.05 26.54 67.06 42.24 26.0 21.42 43.65 40.01 8.11 25.32 29.1 31.08 31.52 114.2 113.41 106.64 24.43 25.47 24.46 24.81
Smo89499 (TPK2)
 5.44 5.39 3.77 5.45 4.26 5.63 3.79 5.23 5.67 6.46 5.97 6.57 5.3 21.97 21.89 10.9 3.17 5.09 5.68 18.83 23.67 2.12 2.71 3.25 6.74 4.65 3.45 3.66 4.6 3.89 6.54 7.1
20.28 22.49 21.68 28.27 34.98 31.0 32.08 36.54 31.67 31.74 26.26 25.86 29.19 33.92 39.88 30.74 21.73 18.55 30.86 36.05 26.69 20.93 22.53 24.97 37.0 93.96 68.15 72.4 25.38 25.27 16.43 17.49
66.1 71.63 61.5 59.97 54.49 62.39 52.73 54.01 70.3 81.13 54.62 78.13 105.81 46.55 31.29 108.85 54.54 85.27 87.29 166.96 112.8 84.4 79.1 76.89 104.81 63.9 48.87 46.05 76.04 68.94 82.91 100.22
51.62 49.58 65.27 66.55 67.7 69.27 66.95 70.63 69.16 62.69 63.79 51.88 81.57 57.64 74.28 92.44 55.87 46.66 81.05 168.2 65.16 109.62 62.69 65.2 98.07 180.16 144.55 172.04 56.61 62.42 43.03 38.24
21.49 34.35 49.8 44.85 41.72 42.33 52.83 36.01 43.45 37.7 32.64 25.21 12.82 10.05 44.03 16.84 35.38 21.88 14.81 35.53 24.4 38.06 17.27 14.04 16.77 28.81 78.36 82.51 21.51 21.36 13.62 13.8

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)