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  5. Smo76827

Smo76827


Description : Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase-activating protein (RAB-GAP)


Gene families : OG0003016 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003016_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo76827
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
Ala_g02924 No alias Rab GTPase-activating protein *(RabGAP9) & original... 0.08 OrthoFinder output from all 47 species
Aop_g10761 No alias Rab GTPase-activating protein *(RabGAP9) & original... 0.07 OrthoFinder output from all 47 species
Gb_32768 No alias RAB-GTPase-activating protein (RAB-GAP) 0.03 OrthoFinder output from all 47 species
Nbi_g19686 No alias Rab GTPase-activating protein *(RabGAP9) & original... 0.07 OrthoFinder output from all 47 species
Spa_g09561 No alias Rab GTPase-activating protein *(RabGAP9) & original... 0.02 OrthoFinder output from all 47 species
Tin_g04521 No alias Rab GTPase-activaTing protein *(RabGAP9) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR000195 Rab-GTPase-TBC_dom 79 286
No external refs found!