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  5. Smo446487

Smo446487 (AFP3)


Aliases : AFP3

Description : RNA biosynthesis.transcriptional repression.AFP/NINJA transcriptional co-repressor


Gene families : OG0001010 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001010_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo446487
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AT1G69260 AFP1 ABI five binding protein 0.03 OrthoFinder output from all 47 species
AT3G29575 AFP3 ABI five binding protein 3 0.02 OrthoFinder output from all 47 species
Aob_g17001 AFP3 transcriptional co-repressor *(AFP/NINJA) & original... 0.01 OrthoFinder output from all 47 species
Dac_g16389 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g08294 NINJA transcriptional co-repressor *(AFP/NINJA) & original... 0.02 OrthoFinder output from all 47 species
Dde_g22166 AFP3 transcriptional co-repressor *(AFP/NINJA) & original... 0.03 OrthoFinder output from all 47 species
Dde_g48828 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01003927001 No alias RNA biosynthesis.transcriptional repression.AFP/NINJA... 0.03 OrthoFinder output from all 47 species
GSVIVT01012225001 AFP2 RNA biosynthesis.transcriptional repression.AFP/NINJA... 0.03 OrthoFinder output from all 47 species
LOC_Os03g30570.1 AFP2, LOC_Os03g30570 transcriptional co-repressor (AFP/NINJA) 0.03 OrthoFinder output from all 47 species
LOC_Os07g41160.1 AFP3, LOC_Os07g41160 transcriptional co-repressor (AFP/NINJA) 0.04 OrthoFinder output from all 47 species
Len_g16334 NINJA not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_16384g0010 AFP3 transcriptional co-repressor (AFP/NINJA) 0.01 OrthoFinder output from all 47 species
Msp_g20542 AFP3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g37601 AFP3 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g41786 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g18071 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g005380.3.1 AFP2, Solyc04g005380 transcriptional co-repressor (AFP/NINJA) 0.03 OrthoFinder output from all 47 species
Tin_g31839 AFP3 not classified & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016790 thiolester hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR032308 TDBD 535 596
No external refs found!