Heatmap: Cluster_11 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
-0.06 -0.21 -0.1 -0.17 0.11 0.18 0.13 -0.1 0.02 -0.4 -0.48 -0.4 -0.81 0.55 1.28 -0.49 -0.17 0.24 0.19 -0.85 -0.16 -0.64 -0.82 -0.62 0.49 -0.74 0.14 0.0 0.05 0.17 0.58 0.5
-1.28 -1.65 -1.48 -1.75 -1.37 -1.54 -1.84 -2.19 -1.8 -1.8 -1.47 -1.76 1.15 1.51 1.53 2.32 -1.77 -0.89 1.41 -3.61 -4.16 -5.73 -1.98 -0.31 -3.68 0.27 0.31 -1.29 -0.43 -0.23 1.49 1.67
0.27 0.13 -0.09 -0.14 -0.25 -0.0 -0.33 -0.27 -0.49 -0.52 -0.57 -0.49 0.04 0.75 1.28 0.19 -0.37 -0.19 0.14 -1.95 -1.28 -0.38 -0.23 -0.1 0.03 0.02 0.33 0.04 -0.52 -0.45 0.87 0.83
0.02 -0.27 -0.19 -0.05 0.26 0.32 0.47 0.24 0.43 0.21 0.34 0.04 -0.83 0.26 0.53 -0.28 0.0 0.12 0.22 -1.64 -1.62 -6.55 -0.32 -0.45 -0.14 -0.14 0.52 0.35 -0.23 -0.03 0.18 0.62
Smo10582 (TMT2)
-1.46 -1.51 -2.14 -1.89 -1.19 -1.89 -1.98 -2.69 -2.56 -2.09 -2.09 -1.79 0.09 2.37 0.93 2.05 -2.66 -0.5 1.27 -0.45 -5.3 -5.36 -2.29 -0.75 -2.24 -0.21 0.82 -0.64 -0.52 -0.48 2.11 1.25
Smo107897 (MTM1)
0.25 -0.2 -0.71 -0.18 -0.0 0.17 0.24 0.27 -0.11 -0.17 -0.44 -0.31 -1.07 0.48 1.64 -0.16 -0.59 -0.82 0.41 -2.68 -1.5 -0.65 -0.71 -0.82 0.36 -1.05 0.32 -0.21 -0.39 -0.24 1.09 1.14
Smo109750 (HSP91)
0.38 0.44 0.22 0.29 0.2 0.19 0.12 -0.09 -0.23 -0.29 -0.26 -0.33 -0.13 0.6 1.08 0.15 -0.38 -0.52 0.12 -4.16 -4.53 -5.36 -0.11 -0.06 -2.74 -0.34 0.49 0.34 -0.65 -0.54 1.31 0.77
Smo109895 (SUC4)
-0.63 -0.65 -0.97 -0.91 -0.96 -0.95 -0.23 -0.23 -0.12 -0.03 -0.03 -0.02 0.67 1.62 0.96 1.57 -1.69 -0.8 -0.24 -3.35 -1.47 -3.88 -0.78 0.09 -1.92 0.23 -0.29 -1.09 -0.51 -0.18 1.61 1.16
Smo110005 (PUR ALPHA-1)
-0.21 -0.32 -0.51 -0.34 -0.24 -0.16 0.02 0.26 -0.08 -0.11 -0.14 -0.28 0.12 0.27 1.09 0.12 -0.22 -0.37 0.39 0.52 -0.76 0.24 -0.12 0.0 -0.76 -0.21 -0.34 -0.42 -0.05 -0.15 0.51 0.5
Smo111632 (FLDH)
-0.37 -0.2 -0.39 0.06 0.09 -0.19 0.14 0.27 0.46 0.44 0.51 0.28 0.67 0.92 1.35 0.33 -0.24 -0.42 -0.2 0.59 -0.68 0.02 -0.8 -1.11 -0.75 -1.34 -0.53 -0.8 -0.45 -0.47 -0.89 -0.43
Smo113714 (ABI1)
-0.83 -0.67 -1.21 -0.98 -0.73 -0.82 0.2 -0.7 -0.43 -0.62 -0.78 -0.75 -0.18 1.71 1.06 0.44 -1.44 -0.38 1.23 -0.56 -0.87 -4.74 -1.26 -1.13 -1.38 -0.39 -0.12 -1.11 0.34 1.09 1.38 1.4
-0.03 -0.46 -0.64 -0.46 -0.4 -0.33 -0.47 -0.09 -0.19 -0.19 -0.28 -0.03 0.06 0.81 1.1 0.32 -0.49 -0.48 0.65 -0.4 -0.52 -2.59 -0.48 -0.11 0.53 0.24 0.19 -0.1 -0.2 -0.15 0.7 0.69
-0.71 -1.29 -1.45 -1.37 -0.96 -1.05 -0.6 -0.38 -0.28 -0.51 -0.34 -0.67 0.02 1.87 2.01 0.96 -2.17 -0.18 0.61 -0.3 -0.51 -2.06 -1.03 0.06 -1.88 0.06 -0.15 -1.02 -0.64 -0.15 1.01 1.04
-1.51 -2.72 -1.79 -2.23 -2.47 -2.35 -0.96 -1.97 -1.59 -2.24 -2.17 -2.28 -0.5 2.35 1.62 0.54 -3.85 1.32 0.74 -2.14 -1.25 -10.22 -2.85 -1.32 -0.81 -1.82 -0.69 -2.28 -0.12 0.8 2.35 1.88
Smo151384 (HSP81-3)
0.94 0.7 -0.05 0.07 0.02 0.11 -0.36 -0.95 -1.28 -1.36 -1.15 -1.29 -0.56 0.75 1.67 -0.3 -0.57 -0.36 -0.49 -0.25 -2.22 -1.14 -0.49 -0.12 -0.32 -1.49 0.36 0.11 -1.52 -1.41 1.88 0.85
Smo152941 (GT72B1)
-0.89 -0.48 -0.79 -0.52 -0.66 -0.59 -0.22 -0.21 -0.36 -0.68 -1.13 -0.77 1.5 2.16 1.18 0.87 -1.33 -0.53 0.37 -0.8 -3.44 -7.92 -2.74 -1.99 -0.18 0.37 0.46 0.19 0.12 0.97 -0.9 -0.17
-2.22 -2.71 -2.82 -3.22 -2.38 -2.73 -1.76 -2.11 -1.88 -2.39 -2.28 -2.36 0.79 1.48 0.5 2.11 -2.95 0.32 1.12 -1.74 -2.27 -5.33 -1.83 0.16 -2.87 0.34 0.97 -1.13 -0.23 0.23 1.88 2.14
Smo168287 (HSC70-5)
-0.31 -0.17 -0.18 -0.18 0.07 0.18 0.08 -0.13 -0.58 -0.74 -0.84 -0.99 -0.58 -0.46 1.33 -0.5 -0.66 -0.58 0.14 -0.95 -2.39 -1.0 -0.68 -0.48 -0.34 -0.37 0.61 0.19 -0.84 -0.73 1.94 1.7
Smo169833 (GAPC2)
-1.05 -1.65 -2.29 -2.57 -1.88 -2.34 -1.88 -1.19 -0.81 -0.92 -0.88 -0.88 1.14 2.28 0.27 1.3 -2.79 0.06 1.12 -2.45 0.03 -4.79 -1.14 0.44 -0.52 0.75 -0.0 -1.5 -0.66 -0.41 1.04 1.64
Smo171122 (CYTC-2)
-0.24 -0.52 -0.61 -0.47 -0.28 -0.31 -0.64 -0.83 -0.73 -1.0 -0.99 -1.02 -0.06 1.45 1.88 0.25 0.02 0.27 0.42 -0.62 -0.57 0.37 -0.25 -0.29 -0.78 -1.54 -1.22 -1.26 0.13 0.16 0.96 0.86
-3.92 -3.29 -5.66 -5.05 -3.32 -2.61 -3.68 -3.42 -3.62 -3.49 -3.96 -4.2 -0.78 2.81 1.71 1.16 -3.45 -0.56 0.43 0.23 -1.63 -0.97 -3.39 -1.38 -3.56 -3.91 -0.51 -3.28 0.07 1.3 2.32 1.96
-2.27 -2.39 -3.11 -3.41 -2.12 -2.8 -1.61 -1.76 -1.58 -1.48 -2.16 -1.99 -2.12 2.47 -0.64 1.12 -4.27 0.86 -0.22 -2.02 -0.06 -0.95 -2.46 -0.86 -0.61 -1.85 -0.57 -3.01 -0.16 -0.13 2.29 2.81
Smo229853 (KAS1)
0.55 -0.05 -0.28 -0.13 -0.15 -0.43 0.19 0.35 0.21 0.29 0.05 0.19 -0.66 0.34 0.84 -0.01 -0.46 -0.45 0.61 -1.67 -0.13 -1.18 -0.68 -0.37 0.47 -0.06 -0.07 -0.11 -0.3 -0.28 0.48 0.3
Smo233193 (UBC19)
-0.42 -0.88 -0.79 -0.54 -0.44 -0.38 -0.29 0.23 0.37 0.43 0.52 0.26 0.48 0.31 1.51 0.55 -0.39 -0.42 -0.14 0.36 -1.19 0.52 -0.61 -0.36 -0.9 -0.29 -1.02 -1.05 0.22 0.26 0.03 0.03
Smo235975 (MFT)
-1.14 -1.23 -1.39 -1.47 -1.12 -1.36 -0.59 -0.91 -0.71 -0.71 -0.5 -0.79 1.01 1.3 1.18 2.0 -1.9 -0.19 1.14 -4.4 -2.76 -5.63 -1.46 -0.4 -2.71 0.08 -0.63 -1.15 0.42 1.11 1.19 1.22
Smo267228 (J2)
0.55 0.24 -0.04 -0.09 -0.07 -0.04 -0.5 -0.67 -0.82 -0.87 -0.84 -0.94 -0.09 0.89 0.81 0.11 -0.37 -0.4 0.01 -1.13 -2.34 -1.75 0.2 0.5 -0.44 -0.72 0.33 0.17 -0.75 -0.59 1.79 0.91
Smo267300 (HSP81-3)
0.33 0.37 -0.08 -0.13 0.03 0.16 -0.24 -0.7 -1.52 -1.81 -1.59 -1.67 -0.73 0.02 1.42 -0.52 -0.8 -0.71 -0.23 -0.72 -2.42 -1.54 -0.37 0.05 -0.38 -1.48 1.01 0.51 -1.4 -1.38 2.24 1.41
-1.1 -1.69 -2.2 -2.61 -1.98 -2.13 -1.97 -1.64 -1.41 -1.6 -0.91 -1.15 0.14 1.71 0.79 1.74 -2.96 0.01 1.25 -1.94 -2.04 -1.97 -2.52 -0.66 -2.5 0.95 1.63 -0.06 -0.24 -0.1 1.52 1.47
-0.92 -0.91 -0.5 -0.63 -0.55 -0.68 -0.6 -0.62 -0.42 -0.64 -0.59 -0.8 0.64 1.33 1.78 1.11 -1.17 -0.45 -0.66 0.74 -1.07 -0.28 0.5 0.78 -1.0 -0.79 -0.94 -2.12 -0.59 -0.37 0.74 0.86
-1.47 -1.6 -1.44 -1.51 -1.7 -1.56 -1.5 -1.21 -1.16 -1.2 -0.96 -1.34 -0.15 1.62 2.18 0.58 -1.99 -0.28 0.96 0.91 -0.29 0.49 -1.38 -0.49 -1.69 0.81 -0.02 -1.09 -0.66 -0.07 1.12 0.89
-2.32 -1.93 -2.17 -2.54 -1.7 -1.62 -1.47 -2.52 -2.41 -2.76 -2.2 -2.73 0.81 2.58 2.06 2.05 -2.82 -0.04 1.12 -1.42 -3.39 -6.34 -2.11 -0.76 -2.95 -0.25 -0.36 -1.56 -0.05 0.64 0.63 1.33
-2.28 -2.05 -3.17 -3.17 -2.58 -2.33 -2.6 -3.71 -3.38 -3.45 -3.0 -2.76 -0.31 2.89 2.67 0.69 -3.68 0.11 1.5 -1.82 -1.75 -3.97 -3.88 -1.81 -1.8 -1.01 0.76 -1.7 -0.11 0.93 0.81 0.79
Smo271484 (HSP81-3)
0.42 0.58 0.04 0.03 0.16 0.29 -0.07 -0.62 -1.38 -1.62 -1.44 -1.53 -0.69 0.11 1.37 -0.55 -0.82 -0.95 -0.23 -1.17 -2.05 -1.49 -0.33 0.06 -0.57 -1.71 0.79 0.28 -1.36 -1.39 2.24 1.36
-0.97 -1.67 -1.67 -1.7 -1.39 -2.01 -1.8 -0.96 -0.95 -0.81 -0.76 -0.87 0.5 1.61 -0.08 2.01 -1.95 -0.31 1.0 -11.46 -4.31 - -0.17 0.85 -4.45 1.13 0.77 -0.74 -0.43 -0.16 1.1 1.74
-0.12 -0.04 -0.1 0.18 0.27 0.11 0.46 0.21 0.27 0.25 0.12 0.04 -0.5 0.12 1.02 -0.57 -0.34 -0.23 -0.27 -1.56 -0.89 -2.1 -0.49 -0.51 0.08 -0.42 0.72 0.31 -0.54 -0.44 0.53 0.75
-1.58 -1.07 -2.32 -2.09 -2.49 -1.89 -2.27 -2.17 -3.43 -2.49 -1.18 -1.68 -0.56 1.5 1.18 0.61 -0.66 1.14 1.37 -0.34 0.08 -0.32 -2.84 -2.11 -2.18 -3.01 -1.03 -3.89 -0.24 0.99 2.8 1.27
-1.88 -2.14 -1.83 -1.95 -1.88 -1.54 -2.05 -1.91 -1.8 -1.63 -1.83 -1.87 -0.86 1.85 -0.05 0.75 -1.2 0.61 1.7 0.68 -0.59 -2.53 -1.53 -0.7 -0.23 -0.56 0.43 -1.71 -0.07 0.23 1.8 2.15
Smo437770 (OTP84)
-0.68 -0.59 -1.08 -0.84 -0.72 -0.76 0.06 -0.94 -0.81 -1.04 -1.12 -0.8 -1.08 1.89 0.9 0.19 -1.61 -0.03 0.91 -0.89 -0.29 -3.84 -1.69 -1.34 -1.13 0.69 0.93 -0.15 0.27 1.22 0.75 1.15
-2.58 -2.68 -2.23 -2.58 -1.78 -1.88 -1.82 -2.82 -2.09 -3.16 -2.19 -2.59 -0.93 1.52 2.73 0.99 -2.72 1.03 1.02 0.2 -1.68 -4.53 -2.77 -0.93 -3.87 0.09 0.12 -1.0 -0.47 0.03 1.4 2.03
Smo438337 (PFK2)
-0.28 -0.26 -0.25 -0.17 -0.19 -0.24 -0.05 -0.27 -0.07 -0.08 -0.11 -0.13 0.16 1.35 1.05 0.77 -1.04 -0.55 0.48 -1.22 -1.54 -1.33 -0.77 -0.3 -0.42 0.44 0.1 -0.37 -0.45 -0.21 0.81 0.56
-2.63 -2.8 -3.04 -3.23 -2.46 -2.89 -1.8 -1.83 -1.57 -1.78 -1.53 -1.85 0.38 2.1 0.71 1.41 -3.08 0.35 0.76 -0.92 -1.43 -2.66 -1.27 0.13 -3.0 0.25 0.74 -1.49 -0.11 0.46 1.58 2.37
-1.67 -1.92 -2.49 -2.78 -2.36 -1.81 -1.07 -1.17 -1.25 -1.07 -1.18 -1.65 0.37 1.54 -0.28 1.28 -2.39 0.53 1.07 -0.29 -0.9 -3.12 -2.0 -0.48 -0.91 0.39 1.13 -0.92 -0.11 0.14 1.77 2.14
Smo440382 (HSC70)
0.9 0.73 -0.11 -0.04 0.02 0.22 -0.44 -1.14 -1.56 -1.71 -1.38 -1.56 -0.35 0.98 1.25 0.16 -0.34 0.24 0.49 -2.02 -3.84 -2.47 0.02 0.18 -2.73 -2.13 0.87 0.31 -0.75 -0.25 1.63 0.67
-0.92 -1.85 -2.34 -2.41 -1.84 -2.02 -1.06 -1.36 -0.72 -1.14 -0.57 -0.88 0.38 1.96 0.96 0.95 -3.06 -0.84 0.85 0.42 -0.29 -2.44 -2.03 -0.77 -1.8 0.62 0.06 -0.8 -0.51 -0.04 1.73 2.0
-2.6 -2.61 -3.07 -2.86 -3.36 -2.44 -2.37 -3.29 -2.83 -3.11 -2.81 -2.6 -0.13 2.21 1.69 1.46 -2.16 0.89 0.51 0.65 -1.09 -0.58 -0.76 0.19 -3.09 -1.04 0.06 -3.13 -0.08 0.36 1.7 1.84
Smo440900 (BIP1)
-0.16 -0.04 -0.5 -0.42 -0.59 -0.7 -0.7 -0.98 -0.88 -0.86 -0.65 -0.91 -0.04 1.23 2.16 -0.02 -0.2 -0.37 0.06 -3.07 -3.95 -4.36 -0.27 -0.1 -2.67 -0.88 0.31 0.25 -0.84 -0.67 2.16 0.82
-2.61 -2.87 -4.0 -2.96 -2.24 -2.0 -2.03 -2.37 -2.35 -2.79 -2.34 -2.7 -1.26 1.47 2.8 1.05 -2.5 -1.12 1.36 0.29 -1.75 -2.98 -3.07 -0.93 -3.04 -0.16 0.2 -1.42 -0.22 0.19 1.44 2.31
-2.91 -3.95 -3.58 -4.04 -3.52 -3.81 -3.37 -2.53 -2.59 -3.3 -2.97 -3.64 0.21 2.33 0.81 2.3 -2.44 0.81 0.57 -2.11 -1.05 -6.78 -1.62 0.26 -3.11 -0.21 -0.11 -2.02 -0.42 -0.07 1.51 2.47
Smo443450 (ROF2)
-0.63 -0.07 -0.16 -0.05 -0.02 -0.1 -0.13 -0.4 -0.53 -0.72 -0.64 -0.82 -0.83 0.46 1.74 -0.82 -0.9 -1.02 -1.0 -1.46 -2.69 -0.96 -0.92 -0.8 -0.29 -0.25 1.31 1.08 -1.45 -1.28 1.64 1.49
Smo446487 (AFP3)
-0.42 -1.02 -1.1 -1.32 -0.99 -1.31 -0.79 -1.96 -1.48 -1.57 -1.14 -1.04 -0.57 1.61 1.21 0.64 -0.85 -0.61 1.7 -5.64 -0.61 -2.33 -1.69 -1.45 -3.29 -0.04 -0.59 -1.5 0.27 1.03 1.78 2.05
0.19 -2.6 0.48 -1.47 -1.4 -0.74 -1.43 -1.95 - -2.69 -3.55 0.11 -0.58 2.55 2.32 -0.83 -2.0 0.81 -0.9 - - - -1.5 -1.21 -0.94 -2.19 0.01 -0.04 -1.97 -2.35 2.25 1.42
-0.66 -0.51 -0.62 -0.49 -0.07 0.17 -0.1 -0.24 -0.53 -0.97 -0.91 -1.31 -0.36 -0.42 1.38 -0.39 -0.55 -0.36 0.17 0.62 -1.15 0.26 -0.57 -0.06 0.84 -0.31 0.38 0.28 -0.82 -0.56 1.47 0.92
-0.93 -0.91 -0.45 -1.11 -0.41 -0.69 -1.63 -1.83 -1.58 -1.16 -0.64 -1.28 1.6 2.17 1.97 1.93 0.58 0.51 -1.32 -7.61 -1.51 0.2 -2.55 -1.58 -2.38 -2.19 -1.19 -1.15 -0.32 0.18 0.2 -0.06
-0.99 -1.09 -0.79 -0.92 -1.06 -1.24 -0.3 -0.05 -0.11 -0.21 -0.31 -0.68 1.02 1.45 1.37 1.55 -1.35 0.09 0.16 -2.55 -1.8 -0.93 -0.61 0.16 -2.37 0.67 -0.83 -1.5 -0.03 0.15 0.81 0.89
-0.77 -0.66 -0.53 -0.7 -0.72 -0.74 -0.5 -0.48 -0.21 -0.5 -0.4 -0.73 0.65 2.18 0.34 1.12 -1.66 -0.85 0.3 -2.92 -2.1 -1.53 -0.93 -0.7 -0.2 -0.46 -0.26 -0.92 -0.19 -0.02 1.57 1.39
-2.41 -2.06 -3.15 -1.95 -1.69 -1.4 -1.59 -2.11 -1.63 -2.0 -1.88 -2.38 -0.37 2.44 2.53 0.99 -2.47 0.32 0.73 1.04 -0.88 -2.3 -1.0 0.05 -0.44 -0.16 0.31 -0.62 -0.89 -0.36 -0.08 0.81
-0.85 -0.96 -0.89 -0.9 -1.13 -0.77 -0.31 -0.42 -0.39 -0.26 -0.36 -0.56 -0.02 1.46 0.3 0.77 -0.83 0.13 1.02 -2.41 -0.17 -3.67 0.27 0.3 -0.31 -0.14 0.14 -0.68 0.26 0.61 1.02 1.05
-1.76 -2.21 -2.15 -3.14 -2.26 -2.46 -2.37 -2.91 -3.23 -2.98 -2.39 -2.32 0.89 2.6 1.3 1.96 -3.02 0.91 1.13 -3.53 -4.23 -9.23 -2.36 -0.58 -3.07 -1.23 0.24 -2.32 -0.25 0.06 1.57 1.83
Smo97625 (AMY1)
-1.32 -1.3 -0.93 -0.94 -0.18 -0.11 -0.26 -0.52 -0.56 -1.09 -1.16 -1.46 -0.12 1.57 0.18 1.01 -1.42 -0.22 1.67 -3.5 -1.4 -3.06 -0.04 0.42 -1.43 -0.39 0.27 -0.27 -0.03 0.25 1.57 1.14

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.