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  5. Smo442780

Smo442780


Description : Vesicle trafficking.Coat protein II (COPII) coatomer machinery.Sec16 Sar1-GTPase-regulating protein


Gene families : OG0001407 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001407_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo442780

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00148170 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein II (COPII) coatomer... 0.04 OrthoFinder output from all 47 species
AT5G47480 No alias RGPR-related 0.07 OrthoFinder output from all 47 species
Adi_g020088 No alias Sar1-GTPase-regulating protein *(Sec16) & original... 0.02 OrthoFinder output from all 47 species
Adi_g084622 No alias Sar1-GTPase-regulating protein *(Sec16) & original... 0.03 OrthoFinder output from all 47 species
Aev_g18515 No alias Sar1-GTPase-regulating protein *(Sec16) & original... 0.03 OrthoFinder output from all 47 species
Aev_g20694 No alias Sar1-GTPase-regulating protein *(Sec16) & original... 0.02 OrthoFinder output from all 47 species
Ala_g03957 No alias Sar1-GTPase-regulating protein *(Sec16) & original... 0.02 OrthoFinder output from all 47 species
Als_g18271 No alias Sar1-GTPase-regulating protein *(Sec16) & original... 0.04 OrthoFinder output from all 47 species
Aop_g05255 No alias Sar1-GTPase-regulating protein *(Sec16) & original... 0.03 OrthoFinder output from all 47 species
Ceric.06G071900.1 Ceric.06G071900 Sar1-GTPase-regulating protein *(Sec16) & original... 0.07 OrthoFinder output from all 47 species
Dac_g15096 No alias Sar1-GTPase-regulating protein *(Sec16) & original... 0.02 OrthoFinder output from all 47 species
Dcu_g24242 No alias Sar1-GTPase-regulating protein *(Sec16) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g29379 No alias Sar1-GTPase-regulating protein *(Sec16) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01004707001 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.03 OrthoFinder output from all 47 species
GSVIVT01018158001 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.04 OrthoFinder output from all 47 species
Gb_04674 No alias Sar1-GTPase-regulating protein (Sec16) 0.03 OrthoFinder output from all 47 species
LOC_Os02g01490.1 LOC_Os02g01490 Sar1-GTPase-regulating protein (Sec16) 0.04 OrthoFinder output from all 47 species
LOC_Os06g01650.1 LOC_Os06g01650 Sar1-GTPase-regulating protein (Sec16) 0.03 OrthoFinder output from all 47 species
Len_g21143 No alias Sar1-GTPase-regulating protein *(Sec16) & original... 0.02 OrthoFinder output from all 47 species
Lfl_g04293 No alias Sar1-GTPase-regulating protein *(Sec16) & original... 0.03 OrthoFinder output from all 47 species
MA_10427360g0010 No alias Sar1-GTPase-regulating protein (Sec16) 0.02 OrthoFinder output from all 47 species
MA_10427360g0020 No alias Sar1-GTPase-regulating protein (Sec16) 0.07 OrthoFinder output from all 47 species
Mp1g19530.1 No alias Sar1-GTPase-regulating protein (Sec16) 0.06 OrthoFinder output from all 47 species
Msp_g13522 No alias Sar1-GTPase-regulating protein *(Sec16) & original... 0.05 OrthoFinder output from all 47 species
Ore_g08909 No alias Sar1-GTPase-regulating protein *(Sec16) & original... 0.02 OrthoFinder output from all 47 species
Ore_g18247 No alias Sar1-GTPase-regulating protein *(Sec16) & original... 0.04 OrthoFinder output from all 47 species
Ppi_g45058 No alias Sar1-GTPase-regulating protein *(Sec16) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0034.g011231 No alias Sar1-GTPase-regulating protein *(Sec16) & original... 0.04 OrthoFinder output from all 47 species
Sam_g49181 No alias Sar1-GTPase-regulating protein *(Sec16) & original... 0.05 OrthoFinder output from all 47 species
Solyc08g007340.3.1 Solyc08g007340 Sar1-GTPase-regulating protein (Sec16) 0.05 OrthoFinder output from all 47 species
Solyc08g007360.3.1 Solyc08g007360 Sar1-GTPase-regulating protein (Sec16) 0.06 OrthoFinder output from all 47 species
Tin_g13175 No alias Sar1-GTPase-regulaTing protein *(Sec16) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e013404_P001 Zm00001e013404 Sar1-GTPase-regulating protein (Sec16) 0.05 OrthoFinder output from all 47 species
Zm00001e025399_P002 Zm00001e025399 Sar1-GTPase-regulating protein (Sec16) 0.04 OrthoFinder output from all 47 species
Zm00001e029805_P005 Zm00001e029805 Sar1-GTPase-regulating protein (Sec16) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004525 ribonuclease III activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP HCCA
CC GO:0033588 elongator holoenzyme complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR024298 ACE1_Sec16_Sec31 545 807
No external refs found!