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- Species
- Selaginella moellendorffii
- Sequence
- Smo440352
Smo440352 (SNL4)
Aliases : SNL4
Description : Chromatin organisation.histone modifications.histone deacetylation.histone deacetylase machineries.SNL-type component
Gene families : OG0000547 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000547_tree
Expression Profile
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Expression Context Conservation (ECC)
Target Alias Description ECC score Gene Family Method Actions AT3G01320 SNL1 SIN3-like 1 0.05 OrthoFinder output from all 47 species Adi_g058426 SNL4 component *(SNL) of histone deacetylase machineries &... 0.02 OrthoFinder output from all 47 species Ala_g21578 SNL3, ATSIN3, SIN3 component *(SNL) of histone deacetylase machineries &... 0.03 OrthoFinder output from all 47 species Als_g52097 SNL3, ATSIN3, SIN3 component *(SNL) of histone deacetylase machineries &... 0.02 OrthoFinder output from all 47 species Aob_g27014 SNL3, ATSIN3, SIN3 component *(SNL) of histone deacetylase machineries &... 0.03 OrthoFinder output from all 47 species Aob_g29157 SNL3, ATSIN3, SIN3 component *(SNL) of histone deacetylase machineries &... 0.02 OrthoFinder output from all 47 species Aspi01Gene56982.t1 SNL3, ATSIN3,... component *(SNL) of histone deacetylase machineries &... 0.02 OrthoFinder output from all 47 species Azfi_s0008.g011658 SNL4 component *(SNL) of histone deacetylase machineries &... 0.03 OrthoFinder output from all 47 species Cpa|evm.model.tig00001155.28 SNL3, ATSIN3, SIN3 Paired amphipathic helix protein Sin3-like 1... 0.03 OrthoFinder output from all 47 species Cpa|evm.model.tig00021234.23 SNL5 Paired amphipathic helix protein Sin3-like 3... 0.01 OrthoFinder output from all 47 species Cre03.g180800 SNL4 Paired amphipathic helix protein Sin3-like 4... 0.02 OrthoFinder output from all 47 species Dcu_g18941 SNL3, ATSIN3, SIN3 component *(SNL) of histone deacetylase machineries &... 0.05 OrthoFinder output from all 47 species Dcu_g18942 SNL4 component *(SNL) of histone deacetylase machineries &... 0.07 OrthoFinder output from all 47 species Dde_g18720 SNL3, ATSIN3, SIN3 component *(SNL) of histone deacetylase machineries &... 0.03 OrthoFinder output from all 47 species Ehy_g10036 SNL3, ATSIN3, SIN3 component *(SNL) of histone deacetylase machineries &... 0.04 OrthoFinder output from all 47 species Gb_35988 SNL4 component SNL of histone deacetylase machineries 0.03 OrthoFinder output from all 47 species LOC_Os01g01960.1 SNL3, ATSIN3,... component SNL of histone deacetylase machineries 0.02 OrthoFinder output from all 47 species Len_g04844 SNL4 component *(SNL) of histone deacetylase machineries &... 0.02 OrthoFinder output from all 47 species Len_g58076 SNL4 component *(SNL) of histone deacetylase machineries &... 0.03 OrthoFinder output from all 47 species Lfl_g03500 SNL3, ATSIN3, SIN3 component *(SNL) of histone deacetylase machineries &... 0.03 OrthoFinder output from all 47 species Lfl_g03517 SNL3, ATSIN3, SIN3 component *(SNL) of histone deacetylase machineries &... 0.05 OrthoFinder output from all 47 species MA_18241g0010 SNL4 component SNL of histone deacetylase machineries 0.04 OrthoFinder output from all 47 species Mp3g02880.1 SNL4 component SNL of histone deacetylase machineries 0.02 OrthoFinder output from all 47 species Mp7g11300.1 SNL5 Paired amphipathic helix protein Sin3-like 2... 0.05 OrthoFinder output from all 47 species Nbi_g03860 SNL3, ATSIN3, SIN3 component *(SNL) of histone deacetylase machineries &... 0.03 OrthoFinder output from all 47 species Ppi_g09115 SNL4 component *(SNL) of histone deacetylase machineries &... 0.02 OrthoFinder output from all 47 species Solyc02g087360.4.1 SNL2, Solyc02g087360 component SNL of histone deacetylase machineries 0.02 OrthoFinder output from all 47 species Solyc02g087365.1.1 SNL2, Solyc02g087365 Paired amphipathic helix protein Sin3-like 3... 0.02 OrthoFinder output from all 47 species Spa_g18268 SNL4 component *(SNL) of histone deacetylase machineries &... 0.03 OrthoFinder output from all 47 species Zm00001e017111_P002 SNL4, Zm00001e017111 component SNL of histone deacetylase machineries 0.02 OrthoFinder output from all 47 species
Functional Annotation
Type GO Term Name Evidence Source BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan BP GO:0008150 biological_process None Extended BP GO:0009889 regulation of biosynthetic process None Extended BP GO:0010468 regulation of gene expression None Extended BP GO:0010556 regulation of macromolecule biosynthetic process None Extended BP GO:0019219 regulation of nucleobase-containing compound metabolic process None Extended BP GO:0019222 regulation of metabolic process None Extended BP GO:0031323 regulation of cellular metabolic process None Extended BP GO:0031326 regulation of cellular biosynthetic process None Extended BP GO:0050789 regulation of biological process None Extended BP GO:0050794 regulation of cellular process None Extended BP GO:0051171 regulation of nitrogen compound metabolic process None Extended BP GO:0051252 regulation of RNA metabolic process None Extended BP GO:0060255 regulation of macromolecule metabolic process None Extended BP GO:0065007 biological regulation None Extended BP GO:0080090 regulation of primary metabolic process None Extended BP GO:1903506 regulation of nucleic acid-templated transcription None Extended BP GO:2001141 regulation of RNA biosynthetic process None Extended Type GO Term Name Evidence Source BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA MF GO:0003735 structural constituent of ribosome IEP HCCA CC GO:0005929 cilium IEP HCCA BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA BP GO:0006259 DNA metabolic process IEP HCCA BP GO:0006265 DNA topological change IEP HCCA BP GO:0006396 RNA processing IEP HCCA BP GO:0006397 mRNA processing IEP HCCA BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA BP GO:0006807 nitrogen compound metabolic process IEP HCCA BP GO:0006996 organelle organization IEP HCCA BP GO:0008380 RNA splicing IEP HCCA BP GO:0016043 cellular component organization IEP HCCA BP GO:0016070 RNA metabolic process IEP HCCA BP GO:0016071 mRNA metabolic process IEP HCCA CC GO:0031514 motile cilium IEP HCCA BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA CC GO:0042995 cell projection IEP HCCA BP GO:0043170 macromolecule metabolic process IEP HCCA CC GO:0043227 membrane-bounded organelle IEP HCCA BP GO:0044237 cellular metabolic process IEP HCCA BP GO:0044238 primary metabolic process IEP HCCA BP GO:0044260 cellular macromolecule metabolic process IEP HCCA BP GO:0046483 heterocycle metabolic process IEP HCCA BP GO:0051276 chromosome organization IEP HCCA BP GO:0071103 DNA conformation change IEP HCCA BP GO:0071840 cellular component organization or biogenesis IEP HCCA BP GO:0090304 nucleic acid metabolic process IEP HCCA CC GO:0120025 plasma membrane bounded cell projection IEP HCCA BP GO:1901360 organic cyclic compound metabolic process IEP HCCA InterPro domains Description Start Stop IPR031693 Sin3_C 955 1193 External LinksNo external refs found! Loading ... please wait ...