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  5. Smo430895

Smo430895 (SDE3)


Aliases : SDE3

Description : Probable RNA helicase SDE3 OS=Arabidopsis thaliana


Gene families : OG0004014 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004014_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo430895
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
Dac_g11872 SDE3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g02383 SDE3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14593 SDE3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g29751 SDE3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_16213 SDE3 Probable RNA helicase SDE3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_16361 SDE3 Probable RNA helicase SDE3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_18116 SDE3 Probable RNA helicase SDE3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc06g054050.3.1 SDE3, Solyc06g054050 Probable RNA helicase SDE3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP HCCA
MF GO:0004478 methionine adenosyltransferase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0016289 CoA hydrolase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016790 thiolester hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA

No InterPro domains available for this sequence

No external refs found!