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  5. Smo426541

Smo426541


No description available


Gene families : OG0002651 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002651_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo426541
Cluster HCCA: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00195320 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G02990 No alias BEST Arabidopsis thaliana protein match is: CW-type Zinc... 0.06 OrthoFinder output from all 47 species
AT3G62900 No alias CW-type Zinc Finger 0.08 OrthoFinder output from all 47 species
Adi_g024497 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g114343 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g43022 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g21202 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g14406 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g03595 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene04571.t1 Aspi01Gene04571 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.34G045900.1 Ceric.34G045900 not classified & original description: pacid=50623623... 0.09 OrthoFinder output from all 47 species
Dcu_g03192 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g18186 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19968 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g25271 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01010964001 No alias No description available 0.06 OrthoFinder output from all 47 species
GSVIVT01017765001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_16688 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Gb_31926 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os03g22580.2 LOC_Os03g22580 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os07g47360.1 LOC_Os07g47360 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g06725 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp7g19200.1 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Ore_g13062 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g15187 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g28894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03272 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g16207 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g067600.3.1 Solyc01g067600 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc09g074670.4.1 Solyc09g074670 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e035816_P001 Zm00001e035816 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
MF GO:1990380 K48-linked deubiquitinase activity IEP HCCA
InterPro domains Description Start Stop
IPR011124 Znf_CW 507 554
No external refs found!