Sequence Description Alias PCC hrr Smo180368 RNA biosynthesis.transcriptional activation.TAZ histone acetylase transcription factor HAC12 0.9583162922020642 9 Smo415212 G2484-1, ATG2484-1 0.958062692479604 2 Smo407119 RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.ADA3 component 0.9547510654029145 5 Smo420594 RNA biosynthesis.transcriptional activation.MYB superfamily.MYB-related transcription factor ATALY3, ALY3 0.95098932302134 4 Smo443140 Protein MODIFIER OF SNC1 1 OS=Arabidopsis thaliana MOS1 0.9466692360903075 16 Smo170139 ATPase family AAA domain-containing protein At1g05910 OS=Arabidopsis thaliana 0.937304223984283 9 Smo437689 Zinc finger CCCH domain-containing protein 27 OS=Oryza sativa subsp. japonica 0.9356047337638006 16 Smo405878 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.AOD group histone demethylase activities.LDL3 lysine-specific demethylase LDL3 0.9335480687699859 28 Smo449156 RNA biosynthesis.RNA polymerase II-dependent transcription.SPT4/5 transcription elongation factor complex.SPT5 component GTA02, GTA2 0.9329281443852198 9 Smo444132 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).nuclear basket.NUA nucleoporin NUA, AtTPR 0.9324546130187412 33 Smo440209 0.93172616557598 11 Smo173562 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.THO subcomplex.THOC2/Tho2 component THO2, AtTHO2 0.9311940547692747 34 Smo64568 Oligouridylate-binding protein 1 OS=Nicotiana plumbaginifolia 0.9292968586205699 15 Smo442226 Acidic leucine-rich nuclear phosphoprotein 32-related protein 1 OS=Oryza sativa subsp. japonica 0.9276032052123104 14 Smo105976 0.9266721206977167 15 Smo406091 RNA biosynthesis.transcriptional activation.TIFY transcription factor TIFY4A, PPD1 0.92566513698407 16 Smo75107 Protein modification.phosphorylation.CMGC kinase superfamily.DYRK kinase 0.9250271077834217 22 Smo177985 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Snf2-like group.Chd3/Mi-2 chromatin remodeling factor PKL, GYM, CHR6, SSL2, CHD3 0.9247171545773422 48 Smo79168 0.9245193477897186 34 Smo439529 0.9231630293168722 26 Smo447032 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease UBP12 0.9220236938109959 21 Smo60241 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Snf2-like group.Snf2 chromatin remodeling factor 0.921934570484958 22 Smo418782 0.9216251390934949 25 Smo90549 DNA repair endonuclease UVH1 OS=Arabidopsis thaliana UVH1, ATRAD1, RAD1 0.9213766838268721 24 Smo440913 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin loading.SCC2 adherin SCC2, ATSCC2, EMB2773 0.9208490701373211 28 Smo437710 0.9195684483608051 28 Smo440815 RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.CHR5 component CHR5 0.918672925287127 35 Smo439648 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).PRP40C pre-mRNA-processing protein ATPRP40C, PRP40C 0.918064850792037 39 Smo438037 0.9171137202252877 29 Smo407112 SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana SUA 0.9166223075561892 30 Smo405044 0.9162374066702793 31 Smo441667 RNA biosynthesis.transcriptional activation.CAMTA transcription factor CAMTA3, SR1 0.9149576896652888 32 Smo107448 BEACH domain-containing protein B OS=Arabidopsis thaliana 0.9146250766356541 33 Smo402861 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIId basal transcription regulation complex.TAF2 component TAF2 0.9144311410272633 34 Smo441016 RNA biosynthesis.RNA polymerase II-dependent transcription.PAF1C transcription initiation and elongation complex.ELF7/PAF1 component ELF7 0.9140351931650934 57 Smo440060 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.NOT1 component 0.9134760557489723 36 Smo150233 Amino acid metabolism.degradation.branched-chain amino acid.acyl-CoA dehydrogenase oxidation.ETF-QO electron transfer flavoprotein-ubiquinone oxidoreductase ETFQO 0.9122768440329976 37 Smo90313 RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor 0.9107889463893034 38 Smo444506 Phytohormones.auxin.transport.polar auxin transport.BIG regulator protein DOC1, ASA1, UMB1, LPR1, TIR3, CRM1, BIG 0.9100172991558916 39 Smo439148 0.9084970226476549 41 Smo444050 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Swr1-like group.Ino80 chromatin remodeling factor ATINO80, INO80 0.9071878052798347 68 Smo148107 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol II catalytic subunits.subunit 2 EMB1989, RPB2, NRPB2 0.9061726049189032 42 Smo441095 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Rad54-like group.ATRX chromatin remodeling factor CHR20, ATRX 0.9059081206522418 43 Smo82731 0.9055307587128573 44 Smo442417 0.9053845256369233 93 Smo102692 Vesicle trafficking.endomembrane trafficking.protein recycling.deubiquitination.BRO1 deubiquitinase recruiting protein 0.9050031836877499 46 Smo230014 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).U2AF pre-RNA splicing auxiliary factor complex.small subunit ATU2AF35A 0.9047326139581714 47 Smo83934 Pre-mRNA splicing factor SR-like 1 OS=Arabidopsis thaliana ATSRL1 0.9039389892864145 48 Smo446942 Protein EMSY-LIKE 3 OS=Arabidopsis thaliana 0.9037815539324576 49 Smo445658 Exosome complex exonuclease RRP44 homolog A OS=Arabidopsis thaliana EMB2763 0.9034677389634289 90 Smo60640 RNA biosynthesis.transcriptional activation.TAZ histone acetylase transcription factor 0.9019666114412661 98 Smo409136 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.nuclear import and assembly regulation.MINIYO regulator protein 0.9019496361677419 52 Smo169732 External stimuli response.biotic stress.pathogen-associated molecular pattern (PAMP).PTI (pattern-triggered immunity) network.bacterial elicitor response.non-canonical heterotrimeric G-protein complex.XLG atypical G-alpha component XLG3 0.9018810668698941 53 Smo174036 DNA damage response.DNA repair mechanisms.homologous recombination repair (HR).Smc5-Smc6 complex.SMC5 component SMC5 0.9017279626554465 59 Smo175555 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-HCa-type E3 ligase HUB2 0.9014622535604312 80 Smo144057 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group(50.2.7 : 1781.4) & 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B OS=Arabidopsis thaliana FAB1B 0.9009116455824852 56 Smo50676 Lipid metabolism.lipid degradation.phospholipase activities.phospholipase A1 activities.PA-PLA1-type phospholipase A1 0.9006433554939393 57 Smo443360 emb1579 0.9001822254132871 58 Smo438275 Chromatin organisation.chromatin remodeling complexes.ATPase core components.SSO1653-like group.SHPRH chromatin remodeling factor 0.8981237728428682 59 Smo447947 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class III/Trithorax histone methyltransferase component SDG2, ATXR3 0.8972948445491588 73 Smo175519 Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.IMB2 import karyopherin ATTRN1, TRN1 0.8969155285437141 86 Smo449066 TITAN-like protein OS=Arabidopsis thaliana 0.8965885831717695 62 Smo90720 RNA biosynthesis.transcriptional activation.ARR-B transcription factor ARR11 0.8965626914401619 63 Smo99407 0.8963697422291338 64 Smo56793 RNA biosynthesis.transcriptional activation.WRKY transcription factor WRKY26 0.8963675603859056 65 Smo446978 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class I/Ez histone methyltransferase component CLF, SET1, ICU1, SDG1 0.8963292881852242 66 Smo86139 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin regulator complex.SCC3 component 0.8962639021463257 91 Smo443962 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.HECT E3 monomeric ligase UPL6 0.8959251404300524 100 Smo165735 RNA processing.RNA splicing.spliceosome assembly/disassembly.RNA helicase activities.Prp28 RNA helicase 0.8942778128689997 70 Smo445013 0.8940732013123118 71 Smo99756 Pentatricopeptide repeat-containing protein At2g39620 OS=Arabidopsis thaliana 0.8936430979131941 72 Smo60165 Chromatin organisation.histone modifications.histone deacetylation.histone deacetylase machineries.SNL-type component 0.8933046687488018 73 Smo446525 Amino acid metabolism.degradation.branched-chain amino acid.BCAT branched-chain aminotransferase G6PD4 0.8925465807760248 74 Smo438136 RNA biosynthesis.transcriptional activation.JUMONJI transcription factor ELF6 0.892226302441321 75 Smo446107 Amino acid metabolism.degradation.branched-chain amino acid.BCAT branched-chain aminotransferase G6PD4 0.8920642114527374 76 Smo439584 emb2410 0.8910383922667893 77 Smo407204 ELF5 0.8908528007985226 78 Smo446307 Solute transport.primary active transport.ABC superfamily.ABC2 family.subfamily ABCA transporter ABCA1, AtABCA1 0.8908309557043258 79 Smo441074 FIP1[V]-like protein OS=Arabidopsis thaliana FIP1[V], ATFIP1[V], FIPS5, ATFIPS5 0.8903614213593983 80 Smo117217 RNA biosynthesis.transcriptional activation.B3 superfamily.ARF transcription factor ARF6 0.8893107569831421 82 Smo85961 Protein translocation.chloroplast.inner envelope Sec2 post-import insertion system.SecA2 component 0.8889016588608687 83 Smo145504 Cell cycle.interphase.DNA replication.preinitiation.TOP1 DNA topoisomerase TOP1BETA, TOP1 0.8888470735975598 84 Smo74857 Protein degradation.peptidase families.serine-type peptidase activities.subtilisin-type protease families.SBT6.2 protease TPP2 0.887975219484949 86 Smo402018 SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana SUA 0.8879011816411998 87 Smo180454 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-HCb-type E3 ligase ARI8, ATARI8 0.8878599731244233 88 Smo409587 RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIc transcription factor complex.TFC3 promotor-binding component 0.8876223887432012 89 Smo131582 Actin-related protein 5 OS=Arabidopsis thaliana ARP5, ATARP5 0.8874488918316197 90 Smo439443 WPP domain-associated protein OS=Arabidopsis thaliana 0.8870086657490425 92 Smo96730 0.8869035853045532 93 Smo423605 65-kDa microtubule-associated protein 1 OS=Arabidopsis thaliana PLE, MAP65-3, ATMAP65-3 0.8864934533255644 94 Smo173073 RNA biosynthesis.transcriptional activation.bZIP superfamily.DOG transcription factor 0.886236325208001 96 Smo442663 0.8849410715101674 97 Smo169256 Protein degradation.peptidase families.metallopeptidase activities.FtsH endopeptidase activities.FtsH mitochondrial protease complexes.FtsH3/10 matrix-AAA protease heterodimers.Fts3/10 component ftsh10 0.8843335507306234 98 Smo269116 Protein IWS1 homolog 1 OS=Arabidopsis thaliana ATIWS1, IWS1 0.8842220942030685 99 Smo442688 RNA processing.RNA 3-end polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.Symplekin/Pta1 component ESP4 0.883207370055935 100