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  5. Smo424976

Smo424976 (ATSPO11-1)


Aliases : ATSPO11-1

Description : Meiotic recombination protein SPO11-1 OS=Arabidopsis thaliana


Gene families : OG0001338 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001338_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo424976

Target Alias Description ECC score Gene Family Method Actions
LOC_Os03g17610.1 BIN5, RHL2,... DNA topoisomerase 6 subunit A3 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
MA_8091373g0010 BIN5, RHL2 DNA topoisomerase 6 subunit A OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Ore_g35089 BIN5, RHL2 component *(TOP6A) of somatic DNA topoisomerase VI... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
InterPro domains Description Start Stop
IPR013049 Spo11/TopoVI_A_N 87 144
No external refs found!