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Description : Chromatin modification-related protein EAF1 B OS=Arabidopsis thaliana
Gene families : OG0001880 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001880_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Smo424802 | |
| Cluster | HCCA: Cluster_64 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00045p00026940 | evm_27.TU.AmTr_v1... | Chromatin modification-related protein EAF1 A... | 0.02 | OrthoFinder output from all 47 species | |
| AT3G24870 | No alias | Helicase/SANT-associated, DNA binding protein | 0.06 | OrthoFinder output from all 47 species | |
| AT3G24880 | No alias | Helicase/SANT-associated, DNA binding protein | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g107358 | No alias | component *(EAF1) of NuA4 histone acetyltransferase... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g20989 | No alias | component *(EAF1) of NuA4 histone acetyltransferase... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.1Z107100.1 | Ceric.1Z107100 | component *(EAF1) of NuA4 histone acetyltransferase... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g44993 | No alias | component *(EAF1) of NuA4 histone acetyltransferase... | 0.08 | OrthoFinder output from all 47 species | |
| GSVIVT01028685001 | No alias | Chromatin modification-related protein EAF1 A... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_31226 | No alias | component EAF1 of NuA4 histone acetyltransferase complex | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os05g51550.1 | LOC_Os05g51550 | Chromatin modification-related protein EAF1 B... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os08g08000.1 | LOC_Os08g08000 | component EAF1 of NuA4 histone acetyltransferase complex | 0.03 | OrthoFinder output from all 47 species | |
| Len_g14156 | No alias | component *(EAF1) of NuA4 histone acetyltransferase... | 0.04 | OrthoFinder output from all 47 species | |
| Mp2g02900.1 | No alias | component EAF1 of NuA4 histone acetyltransferase complex | 0.04 | OrthoFinder output from all 47 species | |
| Pp3c26_13463V3.1 | Pp3c26_13463 | Helicase/SANT-associated, DNA binding protein | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g42118 | No alias | component *(EAF1) of NuA4 histone acetyltransferase... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g36096 | No alias | component *(EAF1) of NuA4 histone acetyltransferase... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc06g083420.3.1 | Solyc06g083420 | component EAF1 of NuA4 histone acetyltransferase complex | 0.02 | OrthoFinder output from all 47 species | |
| Solyc09g060080.4.1 | Solyc09g060080 | component EAF1 of NuA4 histone acetyltransferase complex | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g15643 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g42104 | No alias | component *(EAF1) of NuA4 histone acetyltransferase... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e020520_P002 | Zm00001e020520 | component EAF1 of NuA4 histone acetyltransferase complex | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e020521_P001 | Zm00001e020521 | component EAF1 of NuA4 histone acetyltransferase complex | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000149 | SNARE binding | IEP | HCCA |
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| CC | GO:0005929 | cilium | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006265 | DNA topological change | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| BP | GO:0006354 | DNA-templated transcription elongation | IEP | HCCA |
| BP | GO:0006368 | transcription elongation by RNA polymerase II | IEP | HCCA |
| BP | GO:0006376 | mRNA splice site selection | IEP | HCCA |
| BP | GO:0006383 | transcription by RNA polymerase III | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0006606 | protein import into nucleus | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | HCCA |
| BP | GO:0006996 | organelle organization | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| BP | GO:0008380 | RNA splicing | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0016043 | cellular component organization | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| BP | GO:0017186 | peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase | IEP | HCCA |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
| BP | GO:0018199 | peptidyl-glutamine modification | IEP | HCCA |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
| MF | GO:0019905 | syntaxin binding | IEP | HCCA |
| BP | GO:0022607 | cellular component assembly | IEP | HCCA |
| BP | GO:0022618 | ribonucleoprotein complex assembly | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| CC | GO:0031514 | motile cilium | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| BP | GO:0033365 | protein localization to organelle | IEP | HCCA |
| BP | GO:0034504 | protein localization to nucleus | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| CC | GO:0042995 | cell projection | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| BP | GO:0051169 | nuclear transport | IEP | HCCA |
| BP | GO:0051170 | import into nucleus | IEP | HCCA |
| BP | GO:0051276 | chromosome organization | IEP | HCCA |
| BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
| BP | GO:0071103 | DNA conformation change | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0071826 | ribonucleoprotein complex subunit organization | IEP | HCCA |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
| BP | GO:0072594 | establishment of protein localization to organelle | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| CC | GO:0120025 | plasma membrane bounded cell projection | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |