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  5. Smo423082

Smo423082


Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.Mpp10 assembly factor


Gene families : OG0005340 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005340_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo423082

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00096p00039880 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.07 OrthoFinder output from all 47 species
AT5G66540 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.1 OrthoFinder output from all 47 species
Aob_g21911 No alias SSU processome assembly factor *(MPP10) & original... 0.03 OrthoFinder output from all 47 species
Aop_g12257 No alias SSU processome assembly factor *(MPP10) & original... 0.03 OrthoFinder output from all 47 species
Cre08.g370601 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.12 OrthoFinder output from all 47 species
GSVIVT01007723001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.09 OrthoFinder output from all 47 species
LOC_Os11g04200.1 LOC_Os11g04200 SSU processome assembly factor (MPP10) 0.04 OrthoFinder output from all 47 species
LOC_Os12g04010.1 LOC_Os12g04010 SSU processome assembly factor (MPP10) 0.02 OrthoFinder output from all 47 species
Len_g02864 No alias SSU processome assembly factor *(MPP10) & original... 0.02 OrthoFinder output from all 47 species
MA_77639g0010 No alias SSU processome assembly factor (MPP10) 0.04 OrthoFinder output from all 47 species
Mp8g00320.1 No alias SSU processome assembly factor (MPP10) 0.09 OrthoFinder output from all 47 species
Msp_g07866 No alias SSU processome assembly factor *(MPP10) & original... 0.02 OrthoFinder output from all 47 species
Ore_g27798 No alias SSU processome assembly factor *(MPP10) & original... 0.02 OrthoFinder output from all 47 species
Solyc03g112820.4.1 Solyc03g112820 SSU processome assembly factor (MPP10) 0.11 OrthoFinder output from all 47 species
Zm00001e032203_P002 Zm00001e032203 SSU processome assembly factor (MPP10) 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0034457 Mpp10 complex IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0030488 tRNA methylation IEP HCCA
BP GO:0032259 methylation IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR012173 Mpp10 23 170
No external refs found!