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  5. Smo418913

Smo418913 (TSK, BRU1, MGO3)


Aliases : TSK, BRU1, MGO3

Description : Cell cycle.interphase.DNA replication.preinitiation.TSK chromatin stabilizing factor


Gene families : OG0009270 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009270_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo418913
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
Aop_g05749 TSK, BRU1, MGO3 chromatin stabilizing factor *(TSK) & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.09G039700.1 TSK, BRU1, MGO3,... chromatin stabilizing factor *(TSK) & original... 0.05 OrthoFinder output from all 47 species
GSVIVT01026545001 TSK, BRU1, MGO3 Cell cycle.interphase.DNA replication.preinitiation.TSK... 0.05 OrthoFinder output from all 47 species
Gb_06807 TSK, BRU1, MGO3 chromatin stabilizing factor (TSK) 0.02 OrthoFinder output from all 47 species
Len_g59655 TSK, BRU1, MGO3 chromatin stabilizing factor *(TSK) & original description: none 0.05 OrthoFinder output from all 47 species
MA_10425879g0010 TSK, BRU1, MGO3 Protein TONSOKU OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_10436754g0010 No alias Protein TONSOKU OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_37605g0010 TSK, BRU1, MGO3 chromatin stabilizing factor (TSK) 0.03 OrthoFinder output from all 47 species
Mp6g14510.1 TSK, BRU1, MGO3 chromatin stabilizing factor (TSK) 0.05 OrthoFinder output from all 47 species
Nbi_g07608 TSK, BRU1, MGO3 chromatin stabilizing factor *(TSK) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc11g005690.3.1 TSK, BRU1, MGO3,... chromatin stabilizing factor (TSK) 0.07 OrthoFinder output from all 47 species
Zm00001e023747_P002 TSK, BRU1, MGO3,... chromatin stabilizing factor (TSK) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
CC GO:0030286 dynein complex IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!