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  5. Smo412681

Smo412681


Description : RNA biosynthesis.transcriptional activation.bHLH transcription factor


Gene families : OG0001169 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001169_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo412681
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AT1G68810 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT2G41130 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G25710 BHLH32, ATAIG1, TMO5 basic helix-loop-helix 32 0.02 OrthoFinder output from all 47 species
GSVIVT01032789001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
MA_65818g0010 No alias transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Msp_g11399 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e004145_P001 Zm00001e004145 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e009972_P001 Zm00001e009972 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e016835_P001 Zm00001e016835 transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species
Zm00001e034395_P001 Zm00001e034395 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 24 71
No external refs found!