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  5. Smo409587

Smo409587


Description : RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIc transcription factor complex.TFC3 promotor-binding component


Gene families : OG0002733 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002733_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo409587

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00113670 evm_27.TU.AmTr_v1... RNA biosynthesis.RNA polymerase III-dependent... 0.05 OrthoFinder output from all 47 species
Ala_g16052 No alias promotor-binding component *(TFC3) of TFIIIc... 0.03 OrthoFinder output from all 47 species
Aop_g04612 No alias promotor-binding component *(TFC3) of TFIIIc... 0.04 OrthoFinder output from all 47 species
Aspi01Gene38886.t1 Aspi01Gene38886 promotor-binding component *(TFC3) of TFIIIc... 0.02 OrthoFinder output from all 47 species
Aspi01Gene38888.t1 Aspi01Gene38888 promotor-binding component *(TFC3) of TFIIIc... 0.02 OrthoFinder output from all 47 species
Azfi_s0089.g042584 No alias promotor-binding component *(TFC3) of TFIIIc... 0.03 OrthoFinder output from all 47 species
Ceric.14G017100.1 Ceric.14G017100 promotor-binding component *(TFC3) of TFIIIc... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001428.4 No alias RNA biosynthesis.RNA polymerase III-dependent... 0.06 OrthoFinder output from all 47 species
Cre12.g518107 No alias RNA biosynthesis.RNA polymerase III-dependent... 0.02 OrthoFinder output from all 47 species
Dcu_g10294 No alias promotor-binding component *(TFC3) of TFIIIc... 0.02 OrthoFinder output from all 47 species
Ehy_g01708 No alias promotor-binding component *(TFC3) of TFIIIc... 0.03 OrthoFinder output from all 47 species
GSVIVT01016771001 No alias RNA biosynthesis.RNA polymerase III-dependent... 0.03 OrthoFinder output from all 47 species
Gb_30476 No alias promotor-binding component TFC3 of TFIIIc transcription... 0.05 OrthoFinder output from all 47 species
LOC_Os02g42200.1 LOC_Os02g42200 promotor-binding component TFC3 of TFIIIc transcription... 0.03 OrthoFinder output from all 47 species
MA_546381g0010 No alias promotor-binding component TFC3 of TFIIIc transcription... 0.02 OrthoFinder output from all 47 species
MA_59941g0010 No alias promotor-binding component TFC3 of TFIIIc transcription... 0.04 OrthoFinder output from all 47 species
MA_60759g0010 No alias promotor-binding component TFC3 of TFIIIc transcription... 0.04 OrthoFinder output from all 47 species
Mp1g26830.1 No alias promotor-binding component TFC3 of TFIIIc transcription... 0.03 OrthoFinder output from all 47 species
Ore_g35774 No alias promotor-binding component *(TFC3) of TFIIIc... 0.03 OrthoFinder output from all 47 species
Ppi_g15417 No alias promotor-binding component *(TFC3) of TFIIIc... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005252 No alias promotor-binding component *(TFC3) of TFIIIc... 0.04 OrthoFinder output from all 47 species
Sam_g24501 No alias promotor-binding component *(TFC3) of TFIIIc... 0.03 OrthoFinder output from all 47 species
Solyc09g009800.3.1 Solyc09g009800 promotor-binding component TFC3 of TFIIIc transcription... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0017038 protein import IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
MF GO:0042393 histone binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
InterPro domains Description Start Stop
IPR007309 TFIIIC_Bblock-bd 117 195
No external refs found!