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  5. Smo408722

Smo408722 (MLH1, ATMLH1)


Aliases : MLH1, ATMLH1

Description : DNA damage response.DNA repair mechanisms.mismatch repair (MMR).MLH1-PMS1 heterodimer.MLH1 component


Gene families : OG0003563 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003563_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo408722
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
Ceric.1Z069400.1 MLH1, ATMLH1,... component *(MLH1) of MLH1-PMS1 heterodimer & original... 0.02 OrthoFinder output from all 47 species
LOC_Os01g72880.1 MLH1, ATMLH1,... component MLH1 of MLH1-PMS1 heterodimer 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0030983 mismatched DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
CC GO:0031248 protein acetyltransferase complex IEP HCCA
CC GO:0031414 N-terminal protein acetyltransferase complex IEP HCCA
CC GO:0031417 NatC complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
CC GO:1902493 acetyltransferase complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR013507 DNA_mismatch_S5_2-like 217 337
No external refs found!