Coexpression cluster: Cluster_56 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0005488 binding 42.86% (21/49) 1.89 0.0 4e-06
GO:0003674 molecular_function 53.06% (26/49) 1.18 7e-06 0.000483
GO:0043167 ion binding 20.41% (10/49) 2.45 1.1e-05 0.000511
GO:1901363 heterocyclic compound binding 20.41% (10/49) 2.18 5.4e-05 0.001535
GO:0097159 organic cyclic compound binding 20.41% (10/49) 2.18 5.4e-05 0.001535
GO:0008270 zinc ion binding 10.2% (5/49) 3.52 7.3e-05 0.001729
GO:0046914 transition metal ion binding 10.2% (5/49) 3.32 0.000139 0.002192
GO:0043169 cation binding 12.24% (6/49) 2.91 0.000139 0.002464
GO:0046872 metal ion binding 12.24% (6/49) 2.93 0.000129 0.002611
GO:0003676 nucleic acid binding 12.24% (6/49) 2.44 0.000796 0.01131
GO:0003690 double-stranded DNA binding 4.08% (2/49) 5.44 0.000968 0.011459
GO:0030983 mismatched DNA binding 4.08% (2/49) 5.44 0.000968 0.011459
GO:0030834 regulation of actin filament depolymerization 2.04% (1/49) 7.83 0.004393 0.015214
GO:0030833 regulation of actin filament polymerization 2.04% (1/49) 7.83 0.004393 0.015214
GO:0030832 regulation of actin filament length 2.04% (1/49) 7.83 0.004393 0.015214
GO:0043254 regulation of protein-containing complex assembly 2.04% (1/49) 7.83 0.004393 0.015214
GO:0008064 regulation of actin polymerization or depolymerization 2.04% (1/49) 7.83 0.004393 0.015214
GO:0051016 barbed-end actin filament capping 2.04% (1/49) 7.83 0.004393 0.015214
GO:0051494 negative regulation of cytoskeleton organization 2.04% (1/49) 7.83 0.004393 0.015214
GO:0051693 actin filament capping 2.04% (1/49) 7.83 0.004393 0.015214
GO:0030835 negative regulation of actin filament depolymerization 2.04% (1/49) 7.83 0.004393 0.015214
GO:0030837 negative regulation of actin filament polymerization 2.04% (1/49) 7.83 0.004393 0.015214
GO:0043244 regulation of protein-containing complex disassembly 2.04% (1/49) 7.83 0.004393 0.015214
GO:0043242 negative regulation of protein-containing complex disassembly 2.04% (1/49) 7.83 0.004393 0.015214
GO:0032970 regulation of actin filament-based process 2.04% (1/49) 7.83 0.004393 0.015214
GO:0032956 regulation of actin cytoskeleton organization 2.04% (1/49) 7.83 0.004393 0.015214
GO:0032535 regulation of cellular component size 2.04% (1/49) 7.83 0.004393 0.015214
GO:0032272 negative regulation of protein polymerization 2.04% (1/49) 7.83 0.004393 0.015214
GO:0032271 regulation of protein polymerization 2.04% (1/49) 7.83 0.004393 0.015214
GO:0031333 negative regulation of protein-containing complex assembly 2.04% (1/49) 7.83 0.004393 0.015214
GO:0090066 regulation of anatomical structure size 2.04% (1/49) 7.83 0.004393 0.015214
GO:1901879 regulation of protein depolymerization 2.04% (1/49) 7.83 0.004393 0.015214
GO:0030688 preribosome, small subunit precursor 2.04% (1/49) 7.83 0.004393 0.015214
GO:0051493 regulation of cytoskeleton organization 2.04% (1/49) 7.83 0.004393 0.015214
GO:0110053 regulation of actin filament organization 2.04% (1/49) 7.83 0.004393 0.015214
GO:1902904 negative regulation of supramolecular fiber organization 2.04% (1/49) 7.83 0.004393 0.015214
GO:1901880 negative regulation of protein depolymerization 2.04% (1/49) 7.83 0.004393 0.015214
GO:1902903 regulation of supramolecular fiber organization 2.04% (1/49) 7.83 0.004393 0.015214
GO:0065008 regulation of biological quality 2.04% (1/49) 7.24 0.006582 0.02077
GO:0051129 negative regulation of cellular component organization 2.04% (1/49) 7.24 0.006582 0.02077
GO:0033043 regulation of organelle organization 2.04% (1/49) 7.24 0.006582 0.02077
GO:0010639 negative regulation of organelle organization 2.04% (1/49) 7.24 0.006582 0.02077
GO:0000469 cleavage involved in rRNA processing 2.04% (1/49) 8.83 0.002199 0.020815
GO:0090305 nucleic acid phosphodiester bond hydrolysis 2.04% (1/49) 8.83 0.002199 0.020815
GO:0090501 RNA phosphodiester bond hydrolysis 2.04% (1/49) 8.83 0.002199 0.020815
GO:0005524 ATP binding 8.16% (4/49) 2.38 0.007196 0.022214
GO:0090304 nucleic acid metabolic process 6.12% (3/49) 2.81 0.008921 0.025335
GO:0030684 preribosome 2.04% (1/49) 6.83 0.008767 0.025406
GO:0044087 regulation of cellular component biogenesis 2.04% (1/49) 6.83 0.008767 0.025406
GO:0032559 adenyl ribonucleotide binding 8.16% (4/49) 2.3 0.008718 0.026341
GO:0030554 adenyl nucleotide binding 8.16% (4/49) 2.23 0.010257 0.02856
GO:0003677 DNA binding 6.12% (3/49) 2.73 0.010496 0.028662
GO:0051128 regulation of cellular component organization 2.04% (1/49) 6.51 0.010947 0.029329
GO:0035639 purine ribonucleoside triphosphate binding 8.16% (4/49) 2.17 0.011766 0.030939
GO:0006284 base-excision repair 2.04% (1/49) 6.24 0.013122 0.033878
GO:0032555 purine ribonucleotide binding 8.16% (4/49) 2.1 0.013843 0.035102
GO:0032553 ribonucleotide binding 8.16% (4/49) 2.09 0.014285 0.035587
GO:0097367 carbohydrate derivative binding 8.16% (4/49) 2.06 0.015428 0.037773
GO:0017076 purine nucleotide binding 8.16% (4/49) 2.04 0.015901 0.038271
GO:0003916 DNA topoisomerase activity 2.04% (1/49) 5.83 0.017458 0.040641
GO:0048523 negative regulation of cellular process 2.04% (1/49) 5.83 0.017458 0.040641
GO:0140640 catalytic activity, acting on a nucleic acid 4.08% (2/49) 3.24 0.018938 0.043375
GO:0006139 nucleobase-containing compound metabolic process 6.12% (3/49) 2.38 0.020089 0.044573
GO:0043168 anion binding 8.16% (4/49) 1.95 0.019881 0.044812
GO:1901265 nucleoside phosphate binding 8.16% (4/49) 1.91 0.021429 0.046106
GO:0000166 nucleotide binding 8.16% (4/49) 1.91 0.021429 0.046106
GO:1990904 ribonucleoprotein complex 2.04% (1/49) 5.51 0.021776 0.046152
GO:0036094 small molecule binding 8.16% (4/49) 1.87 0.023505 0.049083
GO:0006725 cellular aromatic compound metabolic process 6.12% (3/49) 2.28 0.02386 0.049103
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Abrodictyum obscurum HCCA Cluster_45 0.022 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_125 0.017 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_127 0.016 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_326 0.023 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_368 0.015 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_386 0.017 OrthoFinder output from all 47 species Compare
Angiopteris evecta HCCA Cluster_63 0.024 OrthoFinder output from all 47 species Compare
Angiopteris evecta HCCA Cluster_89 0.037 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_7 0.017 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_21 0.019 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_65 0.022 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_81 0.021 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_107 0.02 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_113 0.02 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_38 0.02 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_91 0.017 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_136 0.016 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_17 0.019 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_74 0.025 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_174 0.019 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_185 0.02 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_199 0.025 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_252 0.024 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_272 0.024 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_25 0.016 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_51 0.022 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_89 0.015 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_283 0.018 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_289 0.019 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_293 0.016 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_317 0.037 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_9 0.017 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_46 0.016 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_75 0.017 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_95 0.023 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_110 0.022 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_126 0.017 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_37 0.018 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_53 0.02 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_61 0.022 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_65 0.025 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_92 0.018 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_10 0.016 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_81 0.025 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_141 0.018 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_211 0.021 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_53 0.021 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_42 0.024 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_155 0.034 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_24 0.019 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_112 0.015 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_154 0.015 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_32 0.02 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_139 0.024 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_149 0.016 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_182 0.024 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_205 0.015 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_219 0.024 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_21 0.018 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_22 0.018 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_23 0.019 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_211 0.018 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_56 0.016 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_67 0.016 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_144 0.015 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_18 0.025 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_117 0.035 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_45 0.028 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_31 0.017 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_71 0.018 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_127 0.03 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_139 0.019 OrthoFinder output from all 47 species Compare
Marchantia polymorpha HCCA Cluster_41 0.027 OrthoFinder output from all 47 species Compare
Marchantia polymorpha HCCA Cluster_64 0.018 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_12 0.022 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_168 0.016 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_178 0.026 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_68 0.022 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_97 0.017 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_134 0.023 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_136 0.025 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_150 0.018 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_157 0.023 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_170 0.016 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_176 0.016 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_42 0.019 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_79 0.02 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_212 0.016 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_233 0.021 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_422 0.019 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_58 0.026 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_199 0.026 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_263 0.018 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_42 0.019 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_77 0.017 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_78 0.016 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_53 0.016 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_142 0.016 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_239 0.017 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_11 0.016 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_145 0.031 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_23 0.019 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_61 0.017 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_19 0.041 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_21 0.018 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_22 0.018 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_24 0.027 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_37 0.019 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_44 0.021 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_99 0.028 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_8 0.016 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_45 0.017 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_175 0.017 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_185 0.019 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_200 0.019 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_47 0.019 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_141 0.023 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_172 0.028 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_30 0.041 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_90 0.023 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_105 0.016 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_106 0.022 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_15 0.016 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_59 0.02 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_71 0.028 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_119 0.016 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_123 0.02 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_137 0.016 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_10 0.023 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_18 0.018 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_23 0.018 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_65 0.016 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_79 0.019 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_86 0.023 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_89 0.015 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_120 0.022 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_127 0.022 OrthoFinder output from all 47 species Compare
Sequences (49) (download table)

InterPro Domains

GO Terms

Family Terms